The Frequency of Survivorship in Heterozygous Diploids of Cdc13-1exo1Δ Mutants of S. <i>cerevisiae</i> Is One Survivor Cell in 72 Cells/Generation at 36°C — Oak Academic Publishing
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The Frequency of Survivorship in Heterozygous Diploids of Cdc13-1exo1Δ Mutants of S. <i>cerevisiae</i> Is One Survivor Cell in 72 Cells/Generation at 36°C
Department of Biomedical Technology, Federal University of Technology, Owerri, Nigeria
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Department of Prosthetic and Orthortic, Federal University of Technology, Owerri, Nigeria
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Department of Biomedical Technology, Federal University of Technology, Owerri, Nigeria
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Department of Biomedical Technology, Federal University of Technology, Owerri, Nigeria
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Department of Polymer & Textile Engineering, Federal University of Technology, Owerri, Nigeria
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Department of Biomedical Technology, Federal University of Technology, Owerri, Nigeria
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Department of Biomedical Technology, Federal University of Technology, Owerri, Nigeria
1 Department of Biomedical Technology, Federal University of Technology, Owerri, Nigeria
2 Department of Prosthetic and Orthortic, Federal University of Technology, Owerri, Nigeria
3 Department of Biomedical Technology, Federal University of Technology, Owerri, Nigeria
4 Department of Biomedical Technology, Federal University of Technology, Owerri, Nigeria
5 Department of Polymer & Textile Engineering, Federal University of Technology, Owerri, Nigeria
6 Department of Biomedical Technology, Federal University of Technology, Owerri, Nigeria
7 Department of Biomedical Technology, Federal University of Technology, Owerri, Nigeria
Telomeres cap ends of eukaryotic chromosomes prevent them from degradation and ensur e genomic stability. Cdc13 is an essential telomere recruitment and maintenance protein. A temperature - sensitive point mutation in cdc13 gene leads to telomere impairment, giv ing rise to cdc13-1 mutants that suffer lethality at enhanced temperatures. Deleting Exo1 gene from these mutants, however, leads to the emergence of temperature - tolerant mutants called sur vivors. Yeasts are known to exist as either diploids or haploids. These yeast genotypes generate survivors. The frequency of survivorship in the haploid genotype is one cell in 104 cells/generation at 36 °C , however, the frequency at which they emerge in their diploid counterparts at the same temperature is not known. In this study, we investigated the frequency of Survivorship in heterozygous diploids of cdc13-1exo1 Δ mutants of S. cerevisiae at 36 °C . Diploids were constructed by mating haploid strains of opposite mating type cdc13-1 exo1:LEU strains with strains of cdc13-1 exo1:HIS. The crosses were 1296 × 3181, 2561 × 3182, 1296 × 3182 and 2561 × 3181. Genetic mark ers and phenotypic appearance were considered while mating the mutant cells. Using a stick, a smear of one haploid strain was made on each YEPD plate labelled C2, C8, C9, D1, D14, and D15. A smear of another opposite mating type was made on the previous strain. They were mixed and allowed to mate over night, before culturing on media lacking Luecine and Histidine (-L and -H). Survivors were generated by culturing these diploids at 36 °C . Using SPSS 20.0 software for windows SPSS, 2011, the frequency was determined as one Survivor cell in 72 cells/generation, as their frequency of survivorship averaged 5.9 × 10 - 5 ± 0.04.
Markiewicz-Potoczny, M., Lobanova, A., Loeb, A.M., Ruiz, S. and Lazzerini Denchi, E. (2021) TRF2-Mediated Telomere Protection Is Dispensable in Pluripotent Stem Cells. Nature, 589, 110-115. https://doi.org/10.1038/s41586-020-2959-4
Lundblad, V. and Blackburn, E.H. (1993) An Alternative Pathway for Yeast Telomere Maintenance Rescues est1-Senescence. Cell, 73, 347-360. https://doi.org/10.1016/0092-8674(93)90234-H
Dewhurst, S.M., Yao, X., Rosiene, J., De Lange, T. and Imieliński, M. (2021) Structural Variant Evolution after Telomere Crisis. Nature Communications, 12, Article No. 2093. https://doi.org/10.1038/s41467-021-21933-7
Zubko, M.K. and Lydall, D. (2006) Linear Chromosome Maintenance in the Absence of Essential Telomere-Capping Proteins. Nature Cell Biology, 8, 734-740. https://doi.org/10.1038/ncb1428
Ayra-Plasencia, J., Ramos-Pérez, C., Santana-Sosa, S., Lisby, M. and Machín, F. (2021) Topoisomerase II Deficiency Leads to a Postreplicative Structural Shift in All Saccharomyces cerevisiae Chromosomes. Scientific Reports, 11, Article No. 14940. https://doi.org/10.1038/s41598-021-93875-5
Ferreira, M.G. and Cooper, J.P. (2004) Two Modes of DNA Double-Strand Break Repair Are Reciprocally Regulated through the Fission Yeast Cell Cycle. Genes Development, 18, 2249-2254. https://doi.org/10.1101/gad.315804
Lim, H. and Surana, U. (1996) Cdc20, β-Transducin Homolog, Links RAD9-Mediated G2/M Checkpoint Control to Mitosis in Saccharomyces cerevisiae. Molecular Genetics and Genomics, 253, 138-148. https://doi.org/10.1007/s004380050306
Foster, S.S., Zubko, M.K., Guillard, S. and Lydall, D. (2006) MRX Protects Telomeric DNA at Uncapped Telomeres of Budding Yeast Cdc13-1 Mutants. DNA Repair (Amst), 135, 840-851. https://doi.org/10.1016/j.dnarep.2006.04.005
Charifi, F., Churikov, D., Eckert-Boulet, N., Simon, M.-N. and Géli, V. (2021) Rad52 SUMOylation Functions as a Molecular Switch That Determines a Balance between the Rad51- and Rad59-Dependent Survivors. iScience, 24, Article ID: 102231. https://doi.org/10.1016/j.isci.2021.102231
Charrier-Savournin, F.B., Chateau, M., Gire, V., Sedivy, J., Piette, J. and Dulić, V. (2004) p21-Mediated Nuclear Retention of Cyclin B1-Cdk1 in Response to Genotoxic Stress. Molecular Biology of the Cell, 15, 3965-3976. https://doi.org/10.1091/mbc.e03-12-0871
Roy, U., Kwon, Y., Marie, L., Lisby, M. and Greene, E.C. (2021) The Rad51 Paralog Complex Rad55-Rad57 Acts as a Molecular Chaperone during Homologous Recombination. Molecular Cell, 81, 1043-1057.e8. https://doi.org/10.1016/j.molcel.2020.12.019
Ambjørn, S.M., Duxin, J.P., Hertz, E.P.T., Lisby, M. and Nilsson, J. (2021) A Complex of BRCA2 and PP2A-B56 Is Required for DNA Repair by Homologous Recombination. Nature Communications, 12, Article No. 5748. https://doi.org/10.1038/s41467-021-26079-0
Teixeira-Silva, A., Ait Saada, A., Hardy, J., Iraqui, I., Nocente, M.C., Fréon, K. and Lambert, S. (2017) The End-Joining Factor Ku Acts in the End-Resection of Double Strand Break-Free Arrested Replication Forks. Nature Communications, 8, Article No. 1982. https://doi.org/10.1038/s41467-017-02144-5
Bowen, N. and Kolodner, R. (2017) Reconstitution of Saccharomyces cerevisiae DNA Polymerase Epsilon-Dependent Mismatch Repair with Purified Proteins. Proceedings of the National Academy of Sciences of the United States of America, 114, 3607-3612. https://doi.org/10.1073/pnas.1701753114
Craig, E.A. and Kurt, J. (1984) Mutations of the Heat Inducible 70 Kilodaiton Genes of Yeast Confer Temperature Sensitive Growth. Cell, 38, 841-849. https://doi.org/10.1016/0092-8674(84)90279-4
Olbrich, T., Vega-Sendino, M., Tillo, D., Nussenzweig, A. and Ruiz, S. (2021) CTCF Is a Barrier for 2C-Like Reprogramming. Nature Communications, 12, Article No. 4856. https://doi.org/10.1038/s41467-021-25072-x
Blackburn, E.H. (2000) Telomere States and Cell Fates. Nature, 408, 53-56. https://doi.org/10.1038/35040500
Lie, S., Banks, P., Lawless, C., Lydall, D. and Petersen, J. (2018) The Contribution of Non-Essential Schizosaccharomyces Pombe Genes to Fitness in Response to Altered Nutrient Supply and Target of Rapamycin Activity. Open Biology, 8, Article ID: 180015. https://doi.org/10.1098/rsob.180015
Shi, Y., Hellinga, H. and Beese, L. (2017) Interplay of Catalysis, Fidelity, Threading, and Processivity in the Exo- and Endonucleolytic Reactions of Human Exonuclease I. Proceedings of the National Academy of Sciences of the United States of America, 114, 6010-6015. https://doi.org/10.1073/pnas.1704845114
Hao, L.Y., Armanios, M., Strong, M.A., Karim, B., Feldser, D.M., Huso, D. and Greider, C.W. (2005) Short Telomeres, Even in the Presence of Telomerase, Limit Tissue Renewal Capacity. Cell, 123, 1121-1131. https://doi.org/10.1016/j.cell.2005.11.020
Garcia, L.E., Zubko, M.K., Zubko, E.I. and Sanchez-Puerta, M.V. (2019) Elucidating Genomic Patterns and Recombination Events in Plant Cybrid Mitochondria. Plant Molecular Biology, 100, 433-450. https://doi.org/10.1007/s11103-019-00869-z
Morafraile, E.C., Hänni, C., Allen, G., Lydall, D. and Zegerman, P. (2019) Checkpoint Inhibition of Origin Firing Prevents DNA Topological Stress. Genes & Development, 33, 1539-1554. https://doi.org/10.1101/gad.328682.119
Rodrigues, J. and Lydall, D. (2018) Paf1 and Ctr9, Core Components of the PAF1 Complex, Maintain Low Levels of Telomeric Repeat Containing RNA. Nucleic Acids Research, 46, 621-634. https://doi.org/10.1093/nar/gkx1131
Strucko, T., Lisby, M. and Mortensen, U.H. (2021) DNA Double-Strand Break-Induced Gene Amplification in Yeast. Methods in Molecular Biology, 2153, 239-252. https://doi.org/10.1007/978-1-0716-0644-5_17
Rodrigues, J. and Lydall, D. (2018) Cis and Trans Interactions between Genes Encoding PAF1 Complex and ESCRT Machinery Components in Yeast. Current Genetics, 64, 1105-1116. https://doi.org/10.1007/s00294-018-0828-6
Torrance, V. and Lydall, D. (2018) Overlapping Open Reading Frames Strongly Reduce Human and Yeast STN1 Gene Expression and Affect Telomere Function. PLoS Genetics, 14, e1007523. https://doi.org/10.1371/journal.pgen.1007523
Betlem, K., Hoksbergen, S., Mansouri, N., Banks, C. and Peeters, M. (2018) Real-Time Analysis of Microbial Growth by Means of the Heat-Transfer Method (HTM) Using Saccharomyces cerevisiae as Model Organism. Physics in Medicine, 6, 1-8. https://doi.org/10.1016/j.phmed.2018.05.001
Rodrigues, J., Banks, P. and Lydall, D. (2018) Vps74 Connects the Golgi Apparatus and Telomeres in Saccharomyces cerevisiae. G3: Genes, Genomes, Genetics, 8, 1807-1816. https://doi.org/10.1534/g3.118.200172
LeBel, C., Rosonina, E., Sealey, D.C., Pryde, F., Lydall, D., Maringele, L. and Harrington, L.A. (2009) Telomere Maintenance and Survival in Saccharomyces cerevisiae in the Absence of Telomerase and RAD52. Genetics, 176, 1659-1665. https://doi.org/10.1534/genetics.109.102939
Makovets, S., Williams, T.L. and Blackburn, E.H. (2008) The Telotype Defines the Telomere State in Saccharomyces cerevisiae and Is Inherited as a Dominant Non-Mendelian Characteristic in Cells Lacking Telomerase. Genetics, 178, 245-257. https://doi.org/10.1534/genetics.107.083030
Okafor, S.A., Okey-Mbata, C.C., Daniel, J.A., Arukalam, F.M., Daniel-Nwosu, E.I. and Okafor, A.L. (2021) Miscellany of Hospital Contact Surfaces Microbiome: A Case Study of Selected Hospitals in Owerri South Eastern Nigeria. African Journal of Medical Physics, Biomedical Engineering and Sciences, 2, 48-57.