Analysis on Genetic Diversity of Radix <i>Astragali</i> by ISSR Markers
- 1 School of Chinese Pharmacy, Beijing University of Chinese Medicine, Beijing, China
- 2 College of Life Science, Shanxi Agricultural University, Taigu, China
- 3 College of Life Science, Shanxi Agricultural University, Taigu, China
- 4 College of Life Science, Shanxi Agricultural University, Taigu, China
- 5 School of Chinese Pharmacy, Beijing University of Chinese Medicine, Beijing, China
- 6 Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing, China
- 7 Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing, China
Abstract
Radix Astragali has been an important traditional Chinese herbal medicine for over 2000 years. It is derived from two plant species, namely, Astragalus mongholicus [ Astragalus membranaceus (Fisch.) Bge. var. mongholicus (Bge.) Hsiao] and Astragalus membranaceus [ Astragalus membranaceus (Fisch.) Bge.] ( Leguminosae ), according to the Pharmacopoeia of the People’s Republic of China. In this study, the genetic diversity and genetic relationships of Radix Astragali in China were analyzed by Inter-Simple Sequence Repeat (ISSR) markers. A total of 25 highly polymorphic ISSR primers were selected to amplify 95 Radix Astragali samples. Among 273 DNA bands amplified, 213 are polymorphic (percentage of polymorphic bands: 78%). The average value of the amplified bands was 10.9 for each primer, and the number varied from 4 to 20. The genetic diversity of the 95 Radix Astragali samples was analyzed by using POPGENE 1.32 software. The Nei’s genetic diversity index ( h ) and Shannon’s information index ( I ) were 0.3590 and 0.5308, respectively, which indicated the abundant genetic diversity of Radix Astragali . The level of genetic diversity in A. membranaceus ( h : 0.3109, I : 0.4657) was slightly lower than that in A. mongholicus ( h : 0.3364, I : 0.4969). Considering the average genetic similarity coefficient by NTSYS analysis to cluster the A. membranaceus of nine habitats and A. mongholicus of five habitats, Radix Astragali samples were clustered into two groups according to place of origin. This clustering is different from traditional clustering, which divides groups according to species. Results obtained from this study will provide a theoretical basis for the molecular study on germplasm resources of Radix Astragali .
- China Pharmacopoeia Committee (2015) Pharmacopoeia of People’s Republic of China, Vol. 1. Chemical Industry Press, Beijing, 302-303.
- Zhao, Y.Z. (2006) Taxonomy and Floristic Geographical Distribution of the Chinese Medicinal Huangqi. Bulletin of Botanica Research, 26, 532-538.
- Fu, L.G. (1992) In China Plant Red Data Book-Rare and Endangered Plants, Vol. 1. Science Press, Beijing, 372-373.
- Gllbert, J.E., Lewis, R.V., Wilkinson, M.J. and Caligari, P.D.S. (1999) Developing an Appropriate Strategy to Assess Genetic Variability in Plant Germplasm Collections. Theoretical and Applied Genetics, 98, 1125-1131. http://dx.doi.org/10.1007/s001220051176
- Prevost, A. and Wilkinson, M.J. (1999) A New System of Comparing PCR Primers Applied to ISSR Fingerprinting of Potato Cultivars. Theoretical and Applied Genetics, 98, 107-112. http://dx.doi.org/10.1007/s001220051046
- Farsani, T.M., Etemadi, N., Sayed-Tabatabaei, B.E. and Talebi, M. (2012) Assessment of Genetic Diversity of Bermudagrass (Cynodon_dactylon) Using ISSR Markers. International Journal of Molecular Sciences, 13, 383-392. http://dx.doi.org/10.3390/ijms13010383
- Omondi, E.O., Debener, T., Linde, M., Abukutsa-Onyango, M., Dinssa, F.F. and Winkelmann, T. (2016) Molecular Markers for Genetic Diversity Studies in African Leafy Vegetables. Advances in Bioscience and Biotechnology, 7, 188-197. http://dx.doi.org/10.4236/abb.2016.73017
- Ansari, S.A., Narayanan, C., Wali, S.A., Kumar, R., Shukal, N. and Rahangdale, S.K. (2012) ISSR Markers for Analysis of Molecular Diversity and Genetic Structure of Indian Teak (Tectona grandis L.f.) Populations. Annals of Forest Research, 55, 11-23.
- Narzary, D., Rana, T.S. and Ranade, S.A. (2012) Genetic Diversity in Inter-Simple Sequence Repeat Profiles across Natural Populations of Indian Pomegranate (Punica granatum L.). Plant Biology, 12, 806-813. http://dx.doi.org/10.1111/j.1438-8677.2009.00273.x
- Farsani, T.M., Etemadi, N., Sayed-Tabatabaei, B.E. and Talebi, M. (2012) Assessment of Genetic Diversity of Bermudagrass (Cynodon dactylon) Using ISSR Markers. International Journal of Molecular Sciences, 13, 383-392. http://dx.doi.org/10.3390/ijms13010383
- Doyle, J.J. and Doyle, J.L. (1987) A Rapid DNA Isolation Procedure for Small Quantities of Fresh Leaf Tissue. Phytochemical Bulletin, 19, 11-15.
- Nei, M. (1978) Estimation of Average Heterozygosity and Genetic Distance from a Small Number of Individuals. Genetics, 89, 583-590.