The variation in solar environments during succession in sago forests is thought to affect the growth of many plant species. To clarify the pattern of plant colonization in sago forests at various successional stages, we constructed eleven 10 m × 10 m quadrats in different solar conditions in sago forests, measured and calculated the relative illumination intensity, collected all plant species in these quadrats, and used two chloroplast gene sequences—the rbcL gene of ferns and the trnL intron of angiosperms to molecularly identify them. The number of ferns increased while the number of herbaceous species decreased during the process of succession. Moreover, the number of woody species was not significantly correlated with the relative light intensity. Based on these results, it can be concluded that woody species colonized and grew at various successional stages but herbaceous species and ferns did the same in the early and late successional stages, respec-tively, in the sago forest.
KeywordsChloroplast DNA (cpDNA)Plant SpeciesSago Palm
Watt, A.S. (1947) Pattern and Process in the Plant Community. Journal of Ecology, 35, 1-22. http://dx.doi.org/10.2307/2256497
Hartshorn, G.S. (1978) Tree Falls and Tropical Forest Dynamics. In: Tomlinson, P.B. and Zimmermann, M.H., Eds., Tropical Trees as Living Systems, Cambridge University Press, Cambridge, 617-638.
Brokaw, N.V.L. (1985) Gap-Phase Regeneration in a Tropical Forest. Ecology, 66, 682-687. http://dx.doi.org/10.2307/1940529
Brokaw, N.V.L. (1987) Gap-Phase Regeneration of Three Pioneer Tree Species in a Tropical Forest. Journal of Ecology, 75, 9-19. http://dx.doi.org/10.2307/2260533
Hubbell, S.P. and Foster, R.B. (1986) Biology, Chance and History and the Structure of Tropical Rain Forest Tree Communities. In: Diamond, J.M. and Case, T. J., Eds., Community Ecology, Harper and Row, New York, 314-329.
Denslow, J.S. (1987) Tropical Rain Forest Gaps and Tree Species Diversity. Annual Review of Ecology and Systematics, 18, 431-451. http://dx.doi.org/10.1146/annurev.es.18.110187.002243
Swaine, M.D., Lieberman, D. and Putz, F.E. (1987) The Dynamics of Tree Populations in Tropical Forest: A Review. Journal of Tropical Ecology, 3, 359-366. http://dx.doi.org/10.1017/S0266467400002339
Martinez-Ramos, M., Alvarez-Buylla, E., Sarukhan, J. and Pinero, D. (1988) Treefall Age Determination and Gap Dynamics in a Tropical Forest. Journal of Ecology, 76, 700-716. http://dx.doi.org/10.2307/2260568
Lawton, R.O. and Putz, F.E. (1988) Natural Disturbance and Gap-Phase Regeneration in a Wind-Exposed Tropical forest. Ecology, 69, 764-777. http://dx.doi.org/10.2307/1941025
Uhl, C., Clark, K., Dezzeo, N. and Maquirino, P. (1988) Vegetation Dynamics in Amazonian Treefall Gaps. Ecology, 69, 751-763. http://dx.doi.org/10.2307/1941024
Van der Meer, P.J. and Bongers, F. (1996) Patterns of Tree-Fall and Branch-Fall in a Tropical Rain Forest in French Guiana. Journal of Ecology, 84, 19-29. http://dx.doi.org/10.2307/2261696
Yamamoto, Y., Yoshida, T., Miyazaki, A., Jong, F.S., Pasolon, Y.B. and Matanubun, H. (2005) Biodiversity and Productivity of Several Sago Palm Varieties in Indonesia. In: Karafir, Y.P., Jong, F.S. and Fere, V.E., Eds., Sago Palm Development and Utilization, Proceeding of the 8th International Sago Symposium, Jayapura, 4-6 August 2005, 35-40.
Franklin, J.F., Shugart, H.H. and Harmon, M.E. (1987) Tree Death as an Ecological Process. BioScience, 37, 550-556. http://dx.doi.org/10.2307/1310665
Kumekawa, Y., Murjoko, A., Hayakawa, H., Mori, M., Miyazaki, A., Ito, K., Arakawa, R., Fukuda, T., Matanubun, H. and Yamamoto, Y. (2014) Comparison of Species Composition between Different Light Condition of Sago Forest. Sago Palm, 22, 6-12.
Hebert, P.D.N., Cywinska, A., Ball, S.L. and deWaard, J.R. (2003) Biological Identifications through DNA Barcodes. Proceedings of the Royal Society B: Biological Sciences, 270, 313-321. http://dx.doi.org/10.1098/rspb.2002.2218
Kress, W.J., Wurdack, K.J., Zimmer, E.A., Weigt, L.A. and Janzen, D.H. (2005) Use of DNA Barcodes to Identify Flowering Plants. Proceedings of the National Academy of Sciences of the United States of America, 102, 8369-8374. http://dx.doi.org/10.1073/pnas.0503123102
Hasebe, M., Omori, T., Nakazawa, M., Sano, T., Kato, M. and Iwatsuki, K. (1994) rbcL Gene Sequences Provide Evidence for the Evolutionary Lineages of Leptosporangiate Ferns. Proceedings of the National Academy of Sciences of the United States of America, 91, 5730-5734. http://dx.doi.org/10.1073/pnas.91.12.5730
Taberlet, P., Gielly, L., Pautou, G. and Bouvet, J. (1991) Universal Primers for Amplification of Three Non-Coding Regions of Chloroplast DNA. Plant Molecular Biology, 17, 1105-1109. http://dx.doi.org/10.1007/BF00037152
Thompson, J.D., Gibson, T.J., Plewniak, F., Jeanmougin, F. and Higgins, D.G. (1997) The CLUSTAL X Windows Interface: Flexible Strategies for Multiple Sequence Alignment Aided by Quality Analysis Tools. Nucleic Acids Research, 25, 4876-4882. http://dx.doi.org/10.1093/nar/25.24.4876
Koch, H. (2010) Combining Morphology and DNA Barcoding Resolves the Taxonomy of Western Malagasy Liotrigona Moure, 1961 (Hymenoptera: Apidae: Meliponini). African Invertebrates, 51, 413-421. http://dx.doi.org/10.5733/afin.051.0210
Fukuda, T., Song, I.J., Nakamura, T., Nakada, M., Kanno, A., Kameya, T., Yamaji, H., Terabayashi, A., Takeda, S., Aburada, M. and Yokoyama, J. (2005) Molecular Identification of Tiandong Derived from Asparagus cochinchinensis (Lour.) Merrill by Two Typical Deletions in cpDNA. Natural Medicines, 59, 91-94.
Hayakawa, H., Kobayashi, T., Minamiya, Y., Ito, K., Miyazaki, A., Fukuda, T. and Yamamoto, Y. (2010) Molecular Identification of Turmeric (Curcuma longa, Zingiberceae) with a High Curcumin Content. Journal of Japanese Botany, 85, 263-269.
Hayakawa, H., Kobayashi, T., Minamiya, Y., Ito, K., Miyazaki, A., Fukuda, T. and Yamamoto, Y. (2011) Development of a Molecular Marker to Identify a Candidate Line of Turmeric (Curcuma longa L.) with a High Curcumin Content. American Journal of Plant Sciences, 2, 15-26. http://dx.doi.org/10.4236/ajps.2011.21002
Kumekawa, Y., Murjoko, A., Hayakawa, H., Ohga, K., Mori, M., Miyazaki, A., Ito, K., Arakawa, R., Fukuda, T., Matanubun, H. and Yamamoto, Y. (2013) Molecular Analyses of Folk Varieties of the Sago Palm (Metroxylon sagu Rottb) Using the Internal Transcribed Spacer (ITS) Region and Nuclear Microsatellite DNA. Sago Palm, 21, 14-19.
Gilliam, F.S. (2007) The Ecological Significance of the Herbaceous Layer in Temperate Forest Ecosystems. Bioscience, 57, 845-858. http://dx.doi.org/10.1641/B571007
Yamamoto, S. (2000) Forest Gap Dynamics and Tree Regeneration. Journal of Forest Research, 5, 223-229. http://dx.doi.org/10.1007/BF02767114
Nishiyama, Y. and Abe, T. (2003) Estimation of Biomass and Vegetation Coverage of Understories in Old Chamaecyparis obtusa Plantations. The Society of Applied Forest Science, 12, 151-157.
Avise, J.C., Arnold, J., Ball, R.M., Bermingham, E., Lamb, T., Neigel, J.E., Reeb, C.A. and Saunders, N.C. (1987) Intraspecific Phylogeography: The Mitochondrial DNA Bridge between Population Genetics and Systematics. Annual Review of Ecology and Systematics, 18, 489-552.
Schaal, B.A. and Olsen, K.M. (1999) Gene Genealogies and Population Variation in Plants. Proceedings of the National Academy of Sciences of the United States of America, 97, 7024-7029. http://dx.doi.org/10.1073/pnas.97.13.7024
Harter, A.V., Gardner, K.A., Falush, D., Lentz, D.L., Bye, R.A. and Rieseberg, L.H. (2004) Origin of Extant Domesticated Sunflowers in Eastern North America. Nature, 430, 201-205. http://dx.doi.org/10.1038/nature02710
Tanksley, S.D. and McCouch, S.R. (1997) Seed Banks and Molecular Maps: Unlocking Genetic Potential from the Wild. Science, 277, 1063-1066. http://dx.doi.org/10.1126/science.277.5329.1063