Seasonal dormancy is an adaptive mechanism where plants suspend growth and become physiologically inactive to avoid extreme environmental conditions. Environmental factors like temperature, photoperiod, nutrients, and soil moisture control plant growth and development through various complex molecular mechanisms. Crown and seed dormancy of plants are mostly influenced by day length and temperature. Genes and physiological pathways triggered by these two factors along with genotype variability are some targets to manipulate seasonal dormancy. There is genetic variation in the depth and duration of seasonal dormancy. Therefore, their genetic manipulation is possible. Manipulations of summer and fall dormancy are relatively easier compared to winter dormancy because plants require protection of their apical meristem from freezing temperatures and limited water supply. Genetic factors that regulate seed dormancy may also have regulatory role for seasonal dormancy of the maternal plants. Limited genetic and genomic information are available for seasonal dormancy in herbaceous perennial species. Knowledge of genes controlling seasonal dormancy of eudicots, forest trees, and horticultural crops could be interpolated to explore possible dormancy mechanisms in perennial forages. This study reviews current knowledge of seasonal dormancy of herbaceous forages emphasizing the genetic and physiological context that would be valuable to breeders and plant biologists to expand the production season of perennial species by developing non-dormant and semi-dormant cultivars.
Bayer, W. and Waters Bayer, A. (1998) Forage Husbandry. Macmillan.
Bouton, J. (2007) The Economic Benefits of Forage Improvement in the United States. Euphytica, 154, 263-270. https://doi.org/10.1007/s10681-006-9220-6
Peters, M., et al. (2001) The Role of Forages in Reducing Poverty and Degradation of Natural Resources in Tropical Production Systems: Overseas Development Institute (ODI). Agricultural Research & Extension Network (AgREN).
Wedin, W. (1974) 5 Fertilization of Cool-Season Grasses.
Newman, P.R. and Moser, L.E. (1988) Seedling Root Development and Morphology of Cool-Season and Warm-Season Forage Grasses. Crop Science, 28, 148-151. https://doi.org/10.2135/cropsci1988.0011183X002800010032x
Moser, L.E. and Hoveland, C.S. (1996) 1 Cool-Season Grass Overview.
Hsu, F.H., Nelson, C.J. and Matches, A.G. (1985) Temperature Effects on Germination of Perennial Warm-Season Forage Grasses1. Crop Science, 25. https://doi.org/10.2135/cropsci1985.0011183X002500020005x
Lang, G.A., et al. (1987) Endodormancy, Paradormancy, and Ecodormancy—Physiological Terminology and Classification for Dormancy Research. Hortscience, 22, 371-377.
Vegis, A. (1964) Dormancy in Higher Plants. Annual Review of Plant Physiology, 15, 185-224. https://doi.org/10.1146/annurev.pp.15.060164.001153
Kigel, J., et al. (2009) Physiology of Induction and Relaxation of Summer Dormancy in Perennial Grasses. In: Proceedings from the Workshop on Summer Dormancy in Grasses, The Samuel Roberts Noble Foundation, Ardmore.
Volaire, F. and Norton, M. (2006) Summer Dormancy in Perennial Temperate Grasses. Annals of Botany, 98, 927-933. https://doi.org/10.1093/aob/mcl195
Perry, M.C., et al. (1987) Genetic Analysis of Cold Hardiness and Dormancy in Alfalfa. Genome, 29, 144-149. https://doi.org/10.1139/g87-024
Fransen, S., Collins, H. and Boydston, R. (2006) Perennial Warm-Season Grasses for Biofuels. Symposium Proceedings, Western Alfalfa and Forage Conference.
Mislevy, P., Sinclair, T. and Ray, J. (2001) Extended Daylength to Increase Fall/Winter Yields of Warm-Season Perennial Grasses. Proceedings of International Grassland Congress, Sao Pedro, 11-12.
Fagerness, M.J. and Yelverton, F.H. (2000) Tissue Production and Quality of “Tifway” Bermudagrass as Affected by Seasonal Application Patterns of Trinexapac-Ethyl. Crop Science, 40, 493-497. https://doi.org/10.2135/cropsci2000.402493x
Yunfei, Y. and Ling, Z. (1994) Analysis of Winter Dormancy Characters of Vegetadve Forms in Fifteen Perennial Grass Species Populations in Songnen Plain of China. Acta Pratacultural Science, 2.
Bielenberg, D.G. (2015) Comparing Genetic Mechanisms of Bud Chilling Fulfillment and Seed Cold Stratification: A Role for Peach (Prunus persica)? Advances in Plant Dormancy, 257-265. https://doi.org/10.1007/978-3-319-14451-1_15
Rohde, A. and Bhalerao, R.P. (2007) Plant Dormancy in the Perennial Context. Trends in Plant Science, 12, 217-223.
Rao, S., Coleman, S. and Volesky, J. (2000) Yield and Quality of Wheat, Triticale, and Elytricum Forage in the Southern Plains. Crop Science, 40, 1308-1312. https://doi.org/10.2135/cropsci2000.4051308x
Rao, S.C., Northup, B.K. and Mayeux, H.S. (2005) Candidate Cool-Season Legumes for Filling Forage Deficit Periods in the Southern Great Plains. Crop Science, 45, 2068-2074. https://doi.org/10.2135/cropsci2005.0019
Rao, S.C., Akers, S.W. and Ahring, R.M. (1987) Priming Brassica Seed to Improve Emergence under Different Temperatures and Soil Moisture Conditions. Crop Science, 27, 1050-1053. https://doi.org/10.2135/cropsci1987.0011183X002700050045x
Norton, M. (2010) Summer Dormancy in Temperate Forage Plants. http://www.dpi.nsw.gov.au/__data/assets/pdf_file/0004/412636/summer-dormancy-factsheet181011.pdf
Laude, H.M. (1953) The Nature of Summer Dormancy in Perennial Grasses. Botanical Gazette, 114, 284-292. https://doi.org/10.1086/335770
Ofir, M. and Kerem, D. (1982) The Effects of Temperature and Photoperiod on the Onset of Summer Dormancy in Poa bulbosa L. Annals of Botany, 50, 259-264. https://doi.org/10.1093/oxfordjournals.aob.a086363
Oram, R. (1983) Ecotypic Differentiation for Dormancy Levels in Oversummering Buds of Phalaris aquatica L. Botanical Gazette, 144, 544-551. https://doi.org/10.1086/337409
Volaire, F. and Thomas, H. (1995) Effects of Drought on Water Relations, Mineral Uptake, Water-Soluble Carbohydrate Accumulation and Survival of Two Contrasting Populations of Cocksfoot (Dactylis glomerata L.). Annals of Botany, 75, 513-524. https://doi.org/10.1006/anbo.1995.1053
Ofir, M. and Kigel, J. (2003) Variation in Onset of Summer Dormancy and Flowering Capacity along an Aridity Gradient in Poa bulbosa L., a Geophytic Perennial Grass. Annals of Botany, 91, 391-400. https://doi.org/10.1093/aob/mcg026
Shaimi, N., et al. (2009) Summer Dormancy and Drought Survival of Moroccan Ecotypes of Orchardgrass. Crop Science, 49, 1416-1424. https://doi.org/10.2135/cropsci2008.09.0545
Norton, M.R., et al. (2008) Measurement of Summer Dormancy in Temperate Perennial Pasture Grasses. Australian Journal of Agricultural Research, 59, 498-509. https://doi.org/10.1071/AR07343
Volaire, F., et al. (2009) Water Deficit and Induction of Summer Dormancy in Perennial Mediterranean Grasses. Annals of Botany, 103, 1337-1346. https://doi.org/10.1093/aob/mcp080
Biddiscombe, E., Rogers, A. and Maller, R. (1977) Summer Dormancy, Regeneration and Persistence of Perennial Grasses in South-Western Australia. Animal Production Science, 17, 795-801. https://doi.org/10.1071/EA9770795
Norton, M., Volaire, F. and Lelievre, F. (2006) Summer Dormancy in Festuca arundinacea Schreb.; the Influence of Season of Sowing and a Simulated Mid-Summer Storm on Two Contrasting Cultivars. Crop and Pasture Science, 57, 1267-1277. https://doi.org/10.1071/AR06082
Volaire, F., Conejero, G. and Lelievre, F. (2001) Drought Survival and Dehydration Tolerance in Dactylis glomerata and Poa bulbosa. Australian Journal of Plant Physiology, 28, 743-754.
Ofir, M. and Kigel, J. (1999) Photothermal Control of the Imposition of Summer Dormancy in Poa bulbosa, a Perennial Grass Geophyte. Physiologia Plantarum, 105, 633-640. https://doi.org/10.1034/j.1399-3054.1999.105406.x
Ofir, M., Koller, D. and Negbi, M. (1967) Studies on Physiology of Regeneration Buds of Hordeum Bulbosum. Botanical Gazette, 128, 25. https://doi.org/10.1086/336378
Ding, R. and Missaoui, A. (2016) Phenotyping Summer Dormancy in Tall Fescue: Establishment of a Surrogate Phenotype and a Dormancy Rating System in Humid Environments. Crop Science, 56, 2579-2593. https://doi.org/10.2135/cropsci2016.02.0092
Norton, M., Lelievre, F. and Volaire, F. (2006) Summer Dormancy in Dactylis glomerata L.: The Influence of Season of Sowing and a Simulated Mid-Summer Storm on Two Contrasting Cultivars. Crop and Pasture Science, 57, 565-575. https://doi.org/10.1071/AR05237
Volaire, F., et al. (2005) Seasonal Patterns of Growth, Dehydrins and Water-Soluble Carbohydrates in Genotypes of Dactylis glomerata Varying in Summer Dormancy. Annals of Botany, 95, 981-990. https://doi.org/10.1093/aob/mci102
Malinowski, D., et al. (2005) Obligatory Summer-Dormant Cool-Season Perennial Grasses for Semiarid Environments of the Southern Great Plains. Agronomy Journal, 97, 147-154. https://doi.org/10.2134/agronj2005.0147
Nielsen-Gammon, J.W., et al. (2005) Extreme Rainfall in Texas: Patterns and Predictability. Physical Geography, 26, 340-364. https://doi.org/10.2747/0272-3646.26.5.340
Hand, M.L., et al. (2010) Evolutionary History of Tall Fescue Morphotypes Inferred from Molecular Phylogenetics of the Lolium-Festuca Species Complex. BMC Evolutionary Biology, 10, 1. https://doi.org/10.1186/1471-2148-10-303
Eagles, C.F. (1989) Temperature-Induced Changes in Cold Tolerance of Lolium perenne. The Journal of Agricultural Science, 113, 339-347. https://doi.org/10.1017/S0021859600070027
Brummer, E.C., Shah, M.M. and Luth, D. (2000) Reexamining the Relationship between Fall Dormancy and Winter Hardiness in Alfalfa. Crop Science, 40, 971-977. https://doi.org/10.2135/cropsci2000.404971x
Sprague, M. and Fuelleman, R. (1941) Measurements of Recovery after Cutting and Fall Dormancy of Varieties and Strains of Alfalfa, Medicago sativa. Journal of the American Society of Agronomy. https://doi.org/10.2134/agronj1941.00021962003300050006x
Heichel, G. and Henjum, K. (1990) Fall Dormancy Response of Alfalfa Investigated with Reciprocal Cleft Grafts. Crop Science, 30, 1123-1127. https://doi.org/10.2135/cropsci1990.0011183X003000050033x
Fairey, D., Fairey, N. and Lefkovitch, L. (1996) The Relationship between Fall Dormancy and Germplasm Source in North American Alfalfa Cultivars. Canadian Journal of Plant Science, 76, 429-433. https://doi.org/10.4141/cjps96-076
Teuber, L., et al. (1998) Fall Dormancy. In Standard Tests to Characterize Alfalfa Cultivars. 36th North American Alfalfa Improve Conference, Bozeman.
Xu, G.-M., et al. (2012) Performance of Alfalfa Varieties with Different Fall Dormancy across Different Production Areas of Henan Province of China. African Journal of Agricultural Research, 7, 6197-6203. https://doi.org/10.5897/AJAR12.644
Ariss, J.J. and Vandemark, G.J. (2007) Assessment of Genetic Diversity among Nondormant and Semidormant Alfalfa Populations using Sequence-Related Amplified Polymorphisms. Crop Science, 47, 2274-2284. https://doi.org/10.2135/cropsci2006.12.0782
Wang, L., et al. (2014) Dormancy Inducing Mechanisms in Turfgrass. Journal of Food, Agriculture & Environment, 12, 1182-1184.
McKenzie, J.S., Paquin, R. and Duke, S.H. (1988) Cold and Heat Tolerance. In: Hanson, A.A., Barnes, D.K. and Hill, R.R., Eds., Alfalfa and Alfalfa Improvement, American Society of Agronomy, Crop Science Society of America, Soil Science Society of America, Madison, 259-302.
Waldron, B., et al. (1998) Controlled Freezing as an Indirect Selection Method for Field Winter Hardiness in Turf-Type Perennial Ryegrass. Crop Science, 38, 811-816. https://doi.org/10.2135/cropsci1998.0011183X003800030032x
Brouwer, D.J., Duke, S.H. and Osborn, T.C. (2000) Mapping Genetic Factors Associated with Winter Hardiness, Fall Growth, and Freezing Injury in Autotetraploid Alfalfa. Crop Science, 40, 1387-1396. https://doi.org/10.2135/cropsci2000.4051387x
Cunningham, S.M., et al. (2001) Winter Hardiness, Root Physiology, and Gene Expression in Successive Fall Dormancy Selections from “Mesilla” and “CUF 101” Alfalfa. Crop Science, 41, 1091-1098. https://doi.org/10.2135/cropsci2001.4141091x
Schwab, P.M., Barnes, D.K. and Sheaffer, C.C. (1996) The Relationship between Field Winter Injury and Fall Growth Score for 251 Alfalfa Cultivars. Crop Science, 36, 418-426. https://doi.org/10.2135/cropsci1996.0011183X003600020034x
Weimer, J. (1929) Some Factors Involved in the Winter-Killing of Alfalfa. Journal of Agricultural Research, 39, 263-283.
Jung, G.A., Shih, S.C. and Shelton, D.C. (1967) Seasonal Changes in Soluble Protein, Nucleic Acids, and Tissue pH Related to Cold Hardiness of Alfalfa. Cryobiology, 4, 11-16.
Wilkinson, J.F. and Duff, D.T. (1972) Effects of Fall Fertilization on Cold Resistance, Color, and Growth of Kentucky Bluegrass. Agronomy Journal, 64, 345-348. https://doi.org/10.2134/agronj1972.00021962006400030027x
Voigt, P.W. (1975) Effect of Fall Mowing on Winter Survival of Lovegrass Strains. Crop Science, 15, 574-577. https://doi.org/10.2135/cropsci1975.0011183X001500040036x
Rukavina, H., Hughes, H. and Johnson, R. (2008) Variation in Saltgrass Growth and Time of Fall Dormancy Related to Geographical and Climatic Factors. Journal of the American Society for Horticultural Science, 133, 127-132.
Gariglio, N., et al. (2012) Chemicals Applied in Fall and Defoliation on Dormancy Evolution and Release in Low-Chill Peach “Flordaking”. Agrociencia (Montevideo), 16, 49-59.
Zhang, S., et al. (2015) De Novo Characterization of Fall Dormant and Nondormant Alfalfa (Medicago sativa L.) Leaf Transcriptome and Identification of Candidate Genes Related to Fall Dormancy. PLoS ONE, 10. https://doi.org/10.1371/journal.pone.0122170
Kallenbach, R.L., et al. (2001) Estimation of Fall Dormancy in Alfalfa by Near Infrared Reflectance Spectroscopy. Crop Science, 41, 774-777. https://doi.org/10.2135/cropsci2001.413774x
Bélanger, G., et al. (2006) Winter Damage to Perennial Forage Crops in Eastern Canada: Causes, Mitigation, and Prediction. Canadian Journal of Plant Science, 86, 33-47. https://doi.org/10.4141/P04-171
Tanino, K.K., et al. (2010) Temperature-Driven Plasticity in Growth Cessation and Dormancy Development in Deciduous Woody Plants: A Working Hypothesis Suggesting How Molecular and Cellular Function Is Affected by Temperature during Dormancy Induction. Plant Molecular Biology, 73, 49-65. https://doi.org/10.1007/s11103-010-9610-y
Olsen, J.E. (2010) Light and Temperature Sensing and Signaling in Induction of Bud Dormancy in Woody Plants. Plant Molecular Biology, 73, 37-47. https://doi.org/10.1007/s11103-010-9620-9
Moser, L.E. and Vogel, K.P. (1995) Switchgrass, Big Bluestem, and Indiangrass. Forages, 1, 409-420.
Newell, L. (1968) Effects of Strain Source and Management Practice on Forage Yields of Two Warm-Season Prairie Grasses. Crop Science, 8, 205-210. https://doi.org/10.2135/cropsci1968.0011183X000800020022x
Van Esbroeck, G.A., Hussey, M.A. and Sanderson, M.A. (2004) Reversal of Dormancy in Switchgrass with Low-Light Photoperiod Extension. Bioresource Technology, 91, 141-144.
Sinclair, T.R., Mislevy, P. and Ray, J.D. (2001) Short Photoperiod Inhibits Winter Growth of Subtropical Grasses. Planta, 213, 488-491. https://doi.org/10.1007/s004250100611
Ofir, M. and Koller, D. (1972) Kinetic Analysis of the Relationships between Flowering and Initiation of the Dormant State in Hordeum bulbosum L. Perennial Grass. Israel Journal of Botany, 21, 21-34.
Ofir, M. and Koller, D. (1974) Relationship between Thermoinduction and Photoinduction of Flowering and Dormancy in Hordeum bulbosum L., a Perennial Grass. Functional Plant Biology, 1, 259-270.
Ofir, M. and Kigel, J. (2007) Regulation of Summer Dormancy by Water Deficit and ABA in Poa bulbosa Ecotypes. Annals of Botany, 99, 293-299. https://doi.org/10.1093/aob/mcl257
Benedict, H. (1940) Effect of Day Length and Temperature on the Flowering and Growth of Four Species of Grasses. Journal of Agricultural Research, 61, 661-671.
Munir, J., et al. (2001) The Effect of Maternal Photoperiod on Seasonal Dormancy in Arabidopsis thaliana (Brassicaceae). American Journal of Botany, 88, 1240-1249. https://doi.org/10.2307/3558335
Duclos, D.V., Altobello, C.O. and Taylor, A.G. (2014) Investigating Seed Dormancy in Switchgrass (Panicum virgatum L.): Elucidating the Effect of Temperature Regimes and Plant Hormones on Embryo Dormancy. Industrial Crops and Products, 58, 148-159.
Salome, P.A., Xie, Q. and McClung, C.R. (2008) Circadian Timekeeping during Early Arabidopsis Development. Plant Physiology, 147, 1110-1125. https://doi.org/10.1104/pp.108.117622
Botto, J.F., Sanchez, R.A. and Casal, J.J. (1995) Role of Phytochrome-B in the Induction of Seed-Germination by Light in Arabidopsis-Thaliana. Journal of Plant Physiology, 146, 307-312.
Donohue, K. and Schmitt, J. (1998) Maternal Environmental Effects in Plants-Adaptive Plasticity? In: Mousseau, T.A. and Fox, C.W., Eds., Maternal Effects as Adaptations, Oxford University Press, Oxford, 137-158.
Marshall, D. and Uller, T. (2007) When Is a Maternal Effect Adaptive? Oikos, 116, 1957-1963. https://doi.org/10.1111/j.2007.0030-1299.16203.x
Karssen, C.M., et al. (1983) Induction of Dormancy during Seed Development by Endogenous Abscisic-Acid—Studies on Abscisic-Acid Deficient Genotypes of Arabidopsis-Thaliana (L) Heynh. Planta, 157, 158-165. https://doi.org/10.1007/BF00393650
Ding, R. and Missaoui, A.M. (2017) Candidate Gene Association with Summer Dormancy in Tall Fescue. Euphytica, 3, 1-22. https://doi.org/10.1007/s10681-016-1810-3
Feng, Y., et al. (2015) Characterization of Summer Dormancy in Narcissus tazetta var. Chinensis and the Role of NtFTs in Summer Dormancy and Flower Differentiation. Scientia Horticulturae, 183, 109-117.
Narges, M., et al. (2015) Molecular Cloning and Expression of a 9-cis-epoxy Carotenoid Dioxygenase Gene (NCED) and Its Relationship to Dormancy in Lilium longiflorum and L. Formosanum. Journal of Horticultural Science & Biotechnology, 90, 121. https://doi.org/10.1080/14620316.2015.11513162
Sudawan, B., et al. (2016) Hydrogen Cyanamide Breaks Grapevine Bud Dormancy in the Summer through Transient Activation of Gene Expression and Accumulation of Reactive Oxygen and Nitrogen Species. BMC Plant Biology, 16, 202. https://doi.org/10.1186/s12870-016-0889-y
Li, X., et al. (2015) Mapping Fall Dormancy and Winter Injury in Tetraploid Alfalfa. Crop Science, 55, 1995-2011. https://doi.org/10.2135/cropsci2014.12.0834
Zhang, S. and Wang, C. (2014) Transcriptome Profiling of Gene Expression in Fall Dormant and Nondormant Alfalfa. Genomics Data, 2, 282-284.
Wolfraim, L.A., et al. (1993) cDNA Sequence, Expression, and Transcript Stability of a Cold Acclimation-Specific Gene, cas18, of Alfalfa (Medicago falcata) Cells. Plant Physiology, 101, 1275-1282. https://doi.org/10.1104/pp.101.4.1275
Alarcón Zúniga, B., et al. (2004) Quantitative Trait Locus Mapping of Winter Hardiness Metabolites in Autotetraploid Alfalfa (M. sativa). Molecular Breeding of Forage and Turf: Proceedings of the 3rd International Symposium, Molecular Breeding of Forage and Turf, Dallas, Texas, and Ardmore, Oklahoma, 18-22 May 2003, 97-104. https://doi.org/10.1007/1-4020-2591-2_9
Li, X., et al. (2014) A Saturated Genetic Linkage Map of Autotetraploid Alfalfa (Medicago sativa L.) Developed using Genotyping-by-Sequencing Is Highly Syntenous with the Medicago truncatula Genome. G3: Genes/Genomes/Genetics, 4, 1971-1979. https://doi.org/10.1534/g3.114.012245
Kellogg, E.A. (2001) Evolutionary History of the Grasses. Plant Physiology, 125, 1198-1205. https://doi.org/10.1104/pp.125.3.1198
Chao, W.S. and Serpe, M.D. (2010) Changes in the Expression of Carbohydrate Metabolism Genes during Three Phases of Bud Dormancy in Leafy Spurge. Plant Molecular Biology, 73, 227-239. https://doi.org/10.1007/s11103-009-9568-9
Saito, T., et al. (2013) Expression of Genomic Structure of the Dormancy-Associated MADS Box Genes MADS13 in Japanese Pears (Pyrus pyrifolia Nakai) That Differ in Their Chilling Requirement for Endodormancy Release. Tree Physiology, 33, 654-667. https://doi.org/10.1093/treephys/tpt037
Horvath, D.P., et al. (2010) Characterization, Expression and Function of Dormancy Associated Mads-Box Genes from Leafy Spurge. Plant Molecular Biology, 73, 169-179. https://doi.org/10.1007/s11103-009-9596-5
Horvath, D.P., et al. (2008) Transcriptome Analysis Identifies Novel Responses and Potential Regulatory Genes Involved in Seasonal Dormancy Transitions of Leafy Spurge (Euphorbia esula L.). BMC Genomics, 9, 1. https://doi.org/10.1186/1471-2164-9-536
Horvath, D. (2009) Common Mechanisms Regulate Flowering and Dormancy. Plant Science, 177, 523-531.
Fujiwara, S., et al. (2008) Circadian Clock Proteins LHY and CCA1 REGULATE SVP Protein Accumulation to Control Flowering in Arabidopsis. The Plant Cell, 20, 2960-2971. https://doi.org/10.1105/tpc.108.061531
Michaels, S.D. (2009) Flowering Time Regulation Produces Much Fruit. Current Opinion in Plant Biology, 12, 75-80.
Salathia, N., et al. (2006) Flowering Locus C-Dependent and -Independent Regulation of the Circadian Clock by the Autonomous and Vernalization Pathways. BMC Plant Biologyogy, 6, 1. https://doi.org/10.1186/1471-2229-6-1
Helliwell, C.A., et al. (2006) The Arabidopsis FLC Protein Interacts Directly in Vivo with SOC1 and FT Chromatin and Is Part of a High-Molecular-Weight Protein Complex. The Plant Journal, 46, 183-192. https://doi.org/10.1111/j.1365-313X.2006.02686.x
Lee, J.H., et al. (2007) Role of SVP in the Control of Flowering Time by Ambient Temperature in Arabidopsis. Genes & Development, 21, 397-402. https://doi.org/10.1101/gad.1518407
Searle, I., et al. (2006) The Transcription Factor FLC Confers a Flowering Response to Vernalization by Repressing Meristem Competence and Systemic Signaling in Arabidopsis. Genes & Development, 20, 898-912. https://doi.org/10.1101/gad.373506
Ibánez, C., et al. (2010) Circadian Clock Components Regulate Entry and Affect Exit of Seasonal Dormancy as Well as Winter Hardiness in Populus Trees. Plant Physiology, 153, 1823-1833. https://doi.org/10.1104/pp.110.158220
McWatters, H.G., et al. (2000) The ELF3 Zeitnehmer Regulates Light Signalling to the Circadian Clock. Nature, 408, 716-720. https://doi.org/10.1038/35047079
Harmer, S.L. (2009) The Circadian System in Higher Plants. Annual Review of Plant Biology, 60, 357-377. https://doi.org/10.1146/annurev.arplant.043008.092054
Bernard, R.L. (1972) Two Genes Affecting Stem Termination in Soybeans. Crop Science, 12, 235-239. https://doi.org/10.2135/cropsci1972.0011183X001200020028x
Danilevskaya, O.N., Meng, X. and Ananiev, E.V. (2010) Concerted Modification of Flowering Time and Inflorescence Architecture by Ectopic Expression of TFL1-Like Genes in Maize. Plant Physiology, 153, 238-251. https://doi.org/10.1104/pp.110.154211
Böhlenius, H., et al. (2006) CO/FT Regulatory Module Controls Timing of Flowering and Seasonal Growth Cessation in Trees. Science, 312, 1040-1043. https://doi.org/10.1126/science.1126038
Eriksson, M.E. (2000) Role of Phytochrome A and Gibberellins in Growth under Long and Short Day Conditions. Swedish University of Agricultural Sciences.
Ruonala, R., et al. (2008) CENL1 Expression in the Rib Meristem Affects Stem Elongation and the Transition to Dormancy in Populus. The Plant Cell, 20, 59-74. https://doi.org/10.1105/tpc.107.056721
Pin, P. and Nilsson, O. (2012) The Multifaceted Roles of Flowering Locus T in Plant Development. Plant, Cell & Environment, 35, 1742-1755. https://doi.org/10.1111/j.1365-3040.2012.02558.x
Mohamed, R., et al. (2010) Populus CEN/TFL1 Regulates First Onset of Flowering, Axillary Meristem Identity and Dormancy Release in Populus. Plant Journal, 62, 674-688. https://doi.org/10.1111/j.1365-313X.2010.04185.x
Subburaj, S., et al. (2016) Phylogenetic Analysis, Lineage-Specific Expansion and Functional Divergence of Seed Dormancy 4-Like Genes in Plants. PLoS ONE, 11, e0153717. https://doi.org/10.1371/journal.pone.0153717
Dennis, F.G.J. (1996) A Physiological Comparison of Seed and Bud Dormancy. In: Ga, L., Ed., Plant Dormancy, Physiology, Biochemistry and Molecular Biology, CAB International, Wallingford, 47-58.
Okagami, N. (1986) Dormancy in Dioscorea-Different Temperature Adaptation of Seeds, Bulbils and Subterranean Organs in Relation to North-South Distribution. Botanical Magazine-Tokyo, 99, 15-27. https://doi.org/10.1007/BF02488619
Baskin, J.M. and Baskin, C.C. (2004) A Classification System for Seed Dormancy. Seed Science Research, 14, 1-16. https://doi.org/10.1079/SSR2003150
Duclos, D.V., et al. (2013) Investigating Seed Dormancy in Switchgrass (Panicum virgatum L.): Understanding the Physiology and Mechanisms of Coat-Imposed Seed Dormancy. Industrial Crops and Products, 45, 377-387.
Finch-Savage, W.E. and Leubner-Metzger, G. (2006) Seed Dormancy and the Control of Germination. New Phytologist, 171, 501-523. https://doi.org/10.1111/j.1469-8137.2006.01787.x
Burson, B.L., Tischler, C.R. and Ocumpaugh, W.R. (2009) Breeding for Reduced Post-Harvest Seed Dormancy in Switchgrass: Registration of TEM-LoDorm Switchgrass Germplasm. Journal of Plant Registrations, 3, 99-103. https://doi.org/10.3198/jpr2008.07.0433crg
Adkins, S.W., Bellairs, S.M. and Loch, D.S. (2002) Seed Dormancy Mechanisms in Warm Season Grass Species. Euphytica, 126, 13-20. https://doi.org/10.1023/A:1019623706427
Costa, M.C.D., et al. (2016) Key Genes Involved in Desiccation Tolerance and Dormancy across Life Forms. Plant Science, 251, 162-168.
Wan, J.M., et al. (2005) Quantitative Trait Loci Associated with Seed Dormancy in Rice. Crop Science, 45, 712-716. https://doi.org/10.2135/cropsci2005.0712
Nakamura, S., et al. (2016) Mitogen-Activated Protein Kinase Kinase 3 Regulates Seed Dormancy in Barley. Current Biology, 26, 775-781.
Lin, R., et al. (2009) QTL Mapping of Dormancy in Barley using the Harrington/Morex and Chevron/Stander Mapping Populations. Crop Science, 49, 841-849. https://doi.org/10.2135/cropsci2008.05.0269
Willis, C.G., et al. (2014) The Evolution of Seed Dormancy: Environmental Cues, Evolutionary Hubs, and Diversification of the Seed Plants. New Phytologist, 203, 300-309. https://doi.org/10.1111/nph.12782
Okamoto, M., et al. (2006) CYP707A1 and CYP707A2, Which Encode Abscisic Acid 8’-Hydroxylases, Are Indispensable for Proper Control of Seed Dormancy and Germination in Arabidopsis. Plant Physiology, 141, 97-107. https://doi.org/10.1104/pp.106.079475
Okamoto, M., et al. (2010) Genome-Wide Analysis of Endogenous Abscisic Acid-Mediated Transcription in Dry and Imbibed Seeds of Arabidopsis using Tiling Arrays. The Plant Journal, 62, 39-51. https://doi.org/10.1111/j.1365-313X.2010.04135.x
Qin, X. and Zeevaart, J.A. (2002) Overexpression of a 9-cis-Epoxycarotenoid Dioxygenase Gene in Nicotiana plumbaginifolia Increases Abscisic Acid and Phaseic Acid Levels and Enhances Drought Tolerance. Plant Physiology, 128, 544-551. https://doi.org/10.1104/pp.010663
Thompson, A.J., et al. (2000) Ectopic Expression of a Tomato 9-cis-Epoxycarotenoid Dioxygenase Gene Causes Over-Production of Abscisic Acid. The Plant Journal, 23, 363-374. https://doi.org/10.1046/j.1365-313x.2000.00789.x
Hilhorst, H.W.M. and Karssen, C.M. (1992) Seed Dormancy and Germination: The Role of Abscisic Acid and Gibberellins and the Importance of Hormone Mutants. Plant Growth Regulation, 11, 225-238. https://doi.org/10.1007/BF00024561
Kermode, A.R. (2005) Role of Abscisic Acid in Seed Dormancy. Journal of Plant Growth Regulation, 24, 319-344. https://doi.org/10.1007/s00344-005-0110-2
Ofir, M. and Kigel, J. (1998) Abscisic Acid Involvement in the Induction of Summer-Dormancy in Poa bulbosa, a Grass Geophyte. Physiologia Plantarum, 102, 163-170. https://doi.org/10.1034/j.1399-3054.1998.1020202.x
Urano, K., et al. (2016) Analysis of Plant Hormone Profiles in Response to Moderate Dehydration Stress. The Plant Journal.
Zheng, C., et al. (2015) Abscisic Acid (ABA) Regulates Grape Bud Dormancy, and Dormancy Release Stimuli May Act through Modification of ABA Metabolism. Journal of Experimental Botany, 66, 1527-1542. https://doi.org/10.1093/jxb/eru519
Cline, M.G. and Oh, C. (2006) A Reappraisal of the Role of Abscisic Acid and Its Interaction with Auxin in Apical Dominance. Annals of Botany, 98, 891-897. https://doi.org/10.1093/aob/mcl173
Avendano López, A.N., et al. (2011) Seed Dormancy in Mexican Teosinte. Crop Science, 51, 2056-2066. https://doi.org/10.2135/cropsci2010.09.0538
Powell, L.E. (1987) Hormonal Aspects of Bud and Seed Dormancy in Temperate-Zone Woody-Plants. Hortscience, 22, 845-850.
Mohapatra, S.S., Poole, R.J. and Dhindsa, R.S. (1988) Abscisic Acid-Regulated Gene Expression in Relation to Freezing Tolerance in Alfalfa. Plant Physiology, 87, 468-473. https://doi.org/10.1104/pp.87.2.468
Koornneef, M., Bentsink, L. and Hilhorst, H. (2002) Seed Dormancy and Germination. Current Opinion in Plant Biology, 5, 33-36.
Kucera, B., Cohn, M.A. and Leubner-Metzger, G. (2005) Plant Hormone Interactions during Seed Dormancy Release and Germination. Seed Science Research, 15, 281-307. https://doi.org/10.1079/SSR2005218
Toh, S., et al. (2008) High Temperature-Induced Abscisic Acid Biosynthesis and Its Role in the Inhibition of Gibberellin Action in Arabidopsis Seeds. Plant Physiology, 146, 1368-1385. https://doi.org/10.1104/pp.107.113738
Grappin, P., et al. (2000) Control of Seed Dormancy in Nicotiana plumbaginifolia: Post-Imbibition Abscisic Acid Synthesis Imposes Dormancy Maintenance. Planta, 210, 279-285. https://doi.org/10.1007/PL00008135
Finkelstein, R. (2010) The Role of Hormones during Seed Development and Germination. In: Davies, P., Eds., Plant Hormones, Springer, 549-573. https://doi.org/10.1007/978-1-4020-2686-7_24
Corbineau, F., et al. (2002) Breakage of Pseudotsuga menziesii Seed Dormancy by Cold Treatment as Related to Changes in Seed ABA Sensitivity and ABA Levels. Physiologia Plantarum, 114, 313-319. https://doi.org/10.1034/j.1399-3054.2002.1140218.x
Argyris, J., et al. (2008) Genetic Variation for Lettuce Seed Thermoinhibition Is Associated with Temperature-Sensitive Expression of Abscisic Acid, Gibberellin, and Ethylene Biosynthesis, Metabolism, and Response Genes. Plant Physiology, 148, 926-947. https://doi.org/10.1104/pp.108.125807
Mauriat, M., Sandberg, L.G. and Moritz, T. (2011) Proper Gibberellin Localization in Vascular Tissue Is Required to Control Auxin-Dependent Leaf Development and Bud Outgrowth in Hybrid Aspen. The Plant Journal, 67, 805-816. https://doi.org/10.1111/j.1365-313X.2011.04635.x
Mornya, P.M.P. and Cheng, F. (2013) Seasonal Changes in Endogenous Hormone and Sugar Contents during Bud Dormancy in Tree Peony. Journal of Applied Horticulture (Lucknow), 15, 159-165.
Henschke, M., Pers, K. and Opalińska, S. (2016) Post-Harvest Longevity of Ornamental Grasses Conditioned in Gibberellic Acid and 8-Hydroxyquinoline Sulphate. Folia Horticulturae, 28, 51-56. https://doi.org/10.1515/fhort-2016-0007
Han, Q.-F., et al. (2011) Characteristics of Endogenous Hormone Variations in the Roots of Alfalfa (Medicago sativa L.) Cultivars of Different Fall Dormancies during Spring Regrowth Stage. Agricultural Sciences in China, 10, 1032-1040.
Zhuang, W., et al. (2015) Metabolic Changes upon Flower Bud Break in Japanese Apricot Are Enhanced by Exogenous GA4. Horticulture Research, 2, 15046. https://doi.org/10.1038/hortres.2015.46
Hartmann, A., et al. (2011) Reactivation of Meristem Activity and Sprout Growth in Potato Tubers Require Both Cytokinin and Gibberellin. Plant Physiology, 155, 776-796. https://doi.org/10.1104/pp.110.168252
Leyser, O. (2003) Regulation of Shoot Branching by Auxin. Trends in Plant Science, 8, 541-545.
Shim, D., et al. (2014) A Molecular Framework for Seasonal Growth-Dormancy Regulation in Perennial Plants. Horticulture Research, 1, 14059. https://doi.org/10.1038/hortres.2014.59
Paul, S., et al. (2016) Tissue- and Cell-Specific Cytokinin Activity in Populus × Canescens Monitored by ARR5: GUS Reporter Lines in Summer and Winter. Frontiers in Plant Science, 7, 652-652. https://doi.org/10.3389/fpls.2016.00652
Cunningham, S., et al. (2003) Raffinose and Stachyose Accumulation, Galactinol Synthase Expression, and Winter Injury of Contrasting Alfalfa Germplasms. Crop Science, 43, 562-570. https://doi.org/10.2135/cropsci2003.0562
Castonguay, Y., et al. (2009) An Indoor Screening Method for Improvement of Freezing Tolerance in Alfalfa. Crop Science, 49, 809-818. https://doi.org/10.2135/cropsci2008.09.0539
Castonguay, Y., et al. (2013) Molecular Physiology and Breeding at the Crossroads of Cold Hardiness Improvement. Physiologia Plantarum, 147, 64-74. https://doi.org/10.1111/j.1399-3054.2012.01624.x
Adhikari, L., et al. (2015) Testing the Efficacy of a Polyester Bagging Method for Selfing Switchgrass. BioEnergy Research, 8, 380-387. https://doi.org/10.1007/s12155-014-9528-3
Liu, X. and Chu, Z. (2015) Genome-Wide Evolutionary Characterization and Analysis of bZIP Transcription Factors and Their Expression Profiles in Response to Multiple Abiotic Stresses in Brachypodium distachyon. BMC Genomics, 16, 227. https://doi.org/10.1186/s12864-015-1457-9
Conesa, A., et al. (2005) Blast2GO: A Universal Tool for Annotation, Visualization and Analysis in Functional Genomics Research. Bioinformatics, 21, 3674-3676. https://doi.org/10.1093/bioinformatics/bti610
Goff, S.A., et al. (2011) The iPlant Collaborative: Cyberinfrastructure for Plant Biology. Frontiers in Plant Science, 2, 34. https://doi.org/10.3389/fpls.2011.00034
Lyons, E., et al. (2014) Comparative Genomics of Grass Genomes using CoGe. In: Handbook of Plant and Crop Physiology, 3rd Edition, CRC Press, 797-816. https://doi.org/10.1201/b16675-44
Kebrom, T.H., Brutnell, T.P. and Finlayson, S.A. (2010) Suppression of Sorghum Axillary Bud Outgrowth by Shade, phyB and Defoliation Signalling Pathways. Plant, Cell & Environment, 33, 48-58.
Sun, M.-Y., et al. (2016) Analysis of Basic Leucine Zipper Genes and Their Expression during Bud Dormancy in Peach (Prunus persica). Plant Physiologyogy and Biochemistry, 104, 54-70.
Ubi, B.E., et al. (2010) Molecular Cloning of Dormancy-Associated MADS-Box Gene Homologs and Their Characterization during Seasonal Endodormancy Transitional Phases of Japanese Pear. Journal of the American Society for Horticultural Science, 135, 174-182.
Yamane, H., et al. (2011) Expressional Regulation of PpDAM5 and PpDAM6, Peach (Prunus persica) Dormancy-Associated MADS-Box Genes, by Low Temperature and Dormancy-Breaking Reagent Treatment. Journal of Experimental Botany, 62, 3481-3488. https://doi.org/10.1093/jxb/err028
Ito, Y. and Nakano, T. (2015) Development and Regulation of Pedicel Abscission in Tomato. Frontiers in Plant Science, 6, 442. https://doi.org/10.3389/fpls.2015.00442
Zhao, Q., et al. (2011) MADS-Box Genes of Maize: Frequent Targets of Selection during Domestication. Genetics Research, 93, 65-75. https://doi.org/10.1017/S0016672310000509
Voogd, C., Wang, T. and Varkonyi-Gasic, E. (2015) Functional and Expression Analyses of Kiwifruit SOC1-Like Genes Suggest That They May Not Have a Role in the Transition to Flowering But May Affect the Duration of Dormancy. Journal of Experimental Botany, 66, 4699-4710. https://doi.org/10.1093/jxb/erv234
Kebrom, T.H., et al. (2010) Vegetative Axillary Bud Dormancy Induced by Shade and Defoliation Signals in the Grasses. Plant Signaling & Behavior, 5, 317-319. https://doi.org/10.4161/psb.5.3.11186
Stafstrom, J.P., et al. (1998) Dormancy-Associated Gene Expression in Pea Axillary Buds. Planta, 205, 547-552. https://doi.org/10.1007/s004250050354
Goldmark, P.J., Dykes, J. and Walker-Simmons, M.K. (1993) Expression of a Bromus secalinus Transcript Associated with Seed Dormancy in Avena fatua and Other Grass Weeds, in Pre-Harvest Sprouting in Cereals 1992. American Association of Cereal Chemists, St Paul, 312-316.
Barrero, J.M., et al. (2012) Grain Dormancy and Light Quality Effects on Germination in the Model Grass Brachypodium distachyon. New Phytologist, 193, 376-386. https://doi.org/10.1111/j.1469-8137.2011.03938.x
Li, C., et al. (2004) Genes Controlling Seed Dormancy and Pre-Harvest Sprouting in a Rice-Wheat-Barley Comparison. Functional & Integrative Genomics, 4, 84-93. https://doi.org/10.1007/s10142-004-0104-3
Ye, H., Foley, M.E. and Gu, X.-Y. (2010) New Seed Dormancy Loci Detected from Weedy Rice-Derived Advanced Populations with Major QTL Alleles Removed from the Background. Plant Science, 179, 612-619.
Gu, X.-Y., et al. (2010) The qSD12 Underlying Gene Promotes Abscisic Acid Accumulation in Early Developing Seeds to Induce Primary Dormancy in Rice. Plant Molecular Biology, 73, 97-104. https://doi.org/10.1007/s11103-009-9555-1
Larson, S.R. and Kellogg, E.A. (2009) Genetic Dissection of Seed Production Traits and Identification of a Major-Effect Seed Retention qtl in Hybrid Leymus (Triticeae) Wildryes. Crop Science, 49, 29-40. https://doi.org/10.2135/cropsci2008.05.0277
Bentsink, L., et al. (2006) Cloning of DOG1, a Quantitative Trait Locus Controlling Seed Dormancy in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America, 103, 17042-17047. https://doi.org/10.1073/pnas.0607877103
Graeber, K., et al. (2012) Molecular Mechanisms of Seed Dormancy. Plant, Cell & Environment, 35, 1769-1786. https://doi.org/10.1111/j.1365-3040.2012.02542.x
Nakamura, S., et al. (2011) A Wheat Homolog of Mother of Ft and TFL1 Acts in the Regulation of Germination. Plant Cell, 23, 3215-3229. https://doi.org/10.1105/tpc.111.088492
Penfield, S. and Hall, A. (2009) A Role for Multiple Circadian Clock Genes in the Response to Signals That Break Seed Dormancy in Arabidopsis. The Plant Cell, 21, 1722-1732. https://doi.org/10.1105/tpc.108.064022
Shu, K., et al. (2016) Two Faces of One Seed: Hormonal Regulation of Dormancy and Germination. Molecular Plant, 9, 34-45.
Liu, Q., et al. (2015) Does Gibberellin Biosynthesis Play a Critical Role in the Growth of Lolium Perenne? Evidence from a Transcriptional Analysis of Gibberellin and Carbohydrate Metabolic Genes after Defoliation. Frontiers in Plant Science, 6, 944. https://doi.org/10.3389/fpls.2015.00944