Molecular Characterisation Reveals the Existence of a Hybridogenous Intermediary Form between Sweet Watermelon and Cow Melon Forms of Watermelon — Oak Academic Publishing
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Molecular Characterisation Reveals the Existence of a Hybridogenous Intermediary Form between Sweet Watermelon and Cow Melon Forms of Watermelon
Department of Research and Specialist Services, Research Services Division, Seed Services Institute,Harare, Zimbabwe
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Department of Research and Specialist Services, Research Services Division, Genetic Resources and Biotechnology Institute,Harare, Zimbabwe
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Department of Plant Breeding, Swedish University of Agricultural Sciences, Uppsala, Sweden
1 Department of Research and Specialist Services, Research Services Division, Seed Services Institute,Harare, Zimbabwe
2 Department of Research and Specialist Services, Research Services Division, Genetic Resources and Biotechnology Institute,Harare, Zimbabwe
3 Department of Plant Breeding, Swedish University of Agricultural Sciences, Uppsala, Sweden
Watermelon research in Southern Africa, has predominantly observed the clear existence of the sweet watermelon and cow melon forms of watermelon, cultivated on farm and even some occurring in the wild. Molecular characterization of 48 watermelon accessions collected from National Genebank of Zimbabwe using 9 SSR markers generated a total of 49 putative alleles. The average number of alleles detected by each primer was 5.4. Analysis of molecular variance within and among accessions of watermelons revealed that only 39% of the total variation resides between these two groups (cow-melons and sweet watermelons), 24% between accession within groups and 37% within accessions. Multivariate analyses employed provide evidence of the existence of introgression between sweet water melons and cow melons, as reflected by some accessions of cow melons, clustering into a hybridogenous group. Most of watermelon accessions within the hybridogenous group [A (II)] were collected from drier communal areas, while those accessions within the cow melon group [A (I)] are mostly from research centers. The separation of cow melons into distinct groups could be indicative of a possible formation of an isolated evolutionary unit.
Mujaju, C., Sehic, J., Werlemark, G., Garkava-Gustavsson, L., Faith, M. and Nybom, H. (2010) Genetic Diversity in Watermelon (Citrullus lanatus) Landraces from Zimbabwe Realeved by RAPD and SSR Markers. Hereditas, 147, 142-153. https://doi.org/10.1111/j.1601-5223.2010.02165.x
Schipper, R.R. (2002) African Indigenous Vegetables: An Over-View of the Cultivated Species. Revised Version on CD ROM, Natural Resources International Limited, London.
Mujaju, C., Zborowska, A., Werlemark, G., Garkava-Gustavsson, L., Andersen, S.B. and Nybom, H. (2011) Genetic Diversity among and within watermelon (Citrullus lanatus) Landraces in Southern Africa. Journal of Horticultural Science and Biotechnology, 86, 353-358. https://doi.org/10.1080/14620316.2011.11512773
Fursa, T.B. (1981) Intraspecific Classification of Water-Melon under Cultivation. Kulturpflanze, 29, 297-300. https://doi.org/10.1007/BF02014757
Chomicki, G. and Renner, S.S. (2015) Watermelon Origin Solved with Molecular Phylogenetics Including Linnaean Material: Another Example of Museomics. New Phytologist, 205, 526-532. https://doi.org/10.1111/nph.13163
Achigan-Dako, E., Avohou, E., Linsoussi, C., Ahanchede, A., Vodouhe, R. and Blattner, F. (2015) Phenetic Characterization of Citrullus spp. (Cucurbitaceae) and Differentiation of Egusi-Type (C. mucosospermus). Genetic Resources and Crop Evolution, 62, 1159-1179. https://doi.org/10.1007/s10722-015-0220-z
Gichimu, B.M., Owuor, B.O., Mwai, G.N. and Dida, M.M. (2009) Morphological Characterisation of Some Wild and Cultivated Watermelon (Citrullus sp) Accessions in Kenya. ARPN Journal of Agricultural and Biological Science, 4, 10-18.
Levi, A., Thomas, C.E., Newman, M., Reddy, O.U.K., Zhang, X. and Xu, Y. (2004) ISSR and AFLP Markers Differ among American Water-Melon Cultivars with Limited Genetic Diversity. Journal of the American Society for Horticultural Science, 129, 553-558. http://journal.ashspublications.org/content/129/4/553.full.pdf+html
Jarret, R.L., Merrick, L.C., Holms, T., Evans, J. and Aradhya, M.K. (1997) Simple Sequence Repeats in Watermelon (Citrullus lanatus (Thunb.) Matsum. & Nakai). Genome, 40, 1297-1306. https://doi.org/10.1139/g97-058 http://www.nrcresearchpress.com/doi/pdf/10.1139/g97-058
Kwon, Y.S., Park, E.K., Lee, W.S., Yi, S.I., Bae, K.M., An, J.S. and Kim, H.Y. (2007) Genetic Assessment of Watermelon (Citrullus lanatus) Varieties Using SSR Markers Developed from Cucurbit Species. Korean Journal of Genetics, 29, 137-146.
Levi, A., Wechter, W.P., Davis, A., Katzir, N., Tadmor, Y.K., Ling, K.S. and Reddy, U.K. (2007) Interspecific Transferability of Watermelon EST-SSR Markers in Cucurbit Species. Hort Science, 42, 1012.
Sheng, Y., Luan, F., Zhang, F. and Davis, A.R. (2012) Genetic Diversity within Chinese Watermelon Ecotypes Compared with Germplasm from Other Countries. Journal of the American Society for Horticultural Science, 137, 144-151. http://journal.ashspublications.org/content/137/3/144.full
Zhang, H., Wang, H., Guo, S., Ren, Y., Gong, G., Weng, Y. and Xu, Y. (2012) Identification and Validation of a Core Set of Microsatellite Markers for Genetic Diversity Analysis in Watermelon, Citrullus lanatus Thumb. Matsum. Nakai. Euphytica, 186, 329-342. https://doi.org/10.1007/s10681-011-0574-z
Gama, R.N.N.S., Santos, C.A.F., Dias, R.C. and Souza, F. (2013) Molecular Characterisation of Watermelon Cultivars Using Microsatellite Markers. Horticultura Brasileira, 31, 522-527. https://doi.org/10.1590/S0102-05362013000400003
Munisse, P., Jensen, B.D. and Andersen, S.B. (2013) Genetic Differentiation of Watermelon Landraces in Mozambique Using Microsatellite Markers. African Journal of Biotechnology, 12, 5513-5521.
Nantoume, A.D., Andersen, S.B. and Jensen, B.D. (2013) Genetic Differentiation of Watermelon Landrace Types in Mali Revealed by Microsatellite (SSR) Markers. Genetic Resources and Crop Evolution, 60, 2129-2141. https://doi.org/10.1007/s10722-013-9980-5
Uluturk, Z.I., Frary, A. and Doganlar, S. (2011) Determination of Genetic Diversity in Watermelon (Citrullus lanatus (Thunb.) Matsum & Nakai) Germplasm. Australian Journal of Crop Science, 5, 1832-1836.
Levi, A., Wechter, W.P. and Davis, A. (2009) EST-PCR Markers Representing Watermelon Fruit Genes Are Polymorphic among Watermelon Heirloom Cultivars Sharing a Narrow Genetic Base. Plant Genetic Resources: Characterisation and Utilization, 7, 16-32. https://doi.org/10.1017/S1479262108014366
Levi, A., Thies, J.A., Wechter, W.P., Harrison, H.F., Simmons, A.M., Reddy, U.K., Nimmakayala, P. and Fei, Z. (2013) High Frequency Oligonucleotides: Targeting Active Gene (HFO-TAG) Markers Revealed Wide Genetic Diversity among Citrullus spp. Accessions Useful for Enhancing Disease or Pest Resistance in Watermelon Cultivars. Genet Resources and Crop Evolution, 60, 427-440. https://doi.org/10.1007/s10722-012-9845-3
Che, K., Liang, C., Wang, Y., Jin, D., Wang, B., Xu, Y., Kang, G. and Zhang, H. (2003) Genetic Assessment of Watermelon Germplasm Using the AFLP Technique. HortScience, 38, 81-84. http://hortsci.ashspublications.org/content/38/1/81.full.pdf+html
Solmaz, I., Sari, N., Aka-Kacar, Y. and Yesim Yalcin-Mendi, N. (2010) The Genetic Characterization of Turkish Watermelon (Citrullus lanatus) Accessions Using RAPD Markers. Genetic Resources and Crop Evolution, 57, 763-771. https://doi.org/10.1007/s10722-009-9515-2
Maggs-Kolling, G.L., Madsen, S. and Christiansen, J.L. (2000) A Phenetic Analysis of Morphological Variation in Citrullus lanatus in Namibia. Genetic Resources and Crop Evolution, 47, 385-393. https://doi.org/10.1023/A:1008751319879
Joobeur, T., Gusmini, G., Zhang, X., Levi, A., Xu, Y., Wehner, T.C., Oliver, M. and Dean, R.A. (2006) Construction of a Watermelon BAC Library and Identification of SSRs Anchored to Melon or Arabidopsis Genomes. Theoretical and Applied Genetics, 112, 1553-1562. https://doi.org/10.1007/s00122-006-0258-6
Smith, J.S.C., Chin, E.C.L., Shu, H., Smith, O.S., Wall, S.J., Senior, M.L., Mitchell, S.E., Kresovich, S. and Ziegle, J. (1997) An Evaluation of the Utility of SSR Loci as Molecular Markers in Maize (Zea mays L.): Comparisons with Data from RFLPS and Pedigree. Theoretical and Applied Genetics, 95, 163-173. https://doi.org/10.1007/s001220050544
Peakall, R. and Smouse, P.E. (2006) GenALEx 6: Genetic Analysis in Excell. Population Genetic Software for Teaching and Research. Molecular Ecology Notes, 6, 288-295. https://doi.org/10.1111/j.1471-8286.2005.01155.x
Wattier, R., Engel, C.R., Saumitou-Laprade, P. and Valero, M. (1998) Short Allele Dominance as a Source of Heterozygote Deficiency at Microsatellite Loci: Experimental Evidence at the Dinucleotide Locus Gv1CT in Gracilaria gracilis (Rhodophyta). Molecular Ecology, 7, 1569-1573. https://doi.org/10.1046/j.1365-294x.1998.00477.x
Nei, M. (1977) F-Statistics and Analysis of Gene Diversity in Subdivided Populations. Annals of Human Genetics, 41, 225-233. https://onlinelibrary.wiley.com/doi/abs/10.1111/j.1469-1809.1977.tb01918.x https://doi.org/10.1111/j.1469-1809.1977.tb01918.x
Excoffier, L., Laval, G. and Schader, S. (2005) Arlequin ver. 3.0: An Integrated Software Package for Population Genetics Data Analysis. Evolutionary Bioinformatics Online, 1, 47-50. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2658868/ https://doi.org/10.1177/117693430500100003
Rohlf, F.J. (2005) NTSYSpc: Numerical Taxonomy and Multivariate Analysis System. Version 2.2. State University of New York, New York. http://www.exetersoftware.com/downloads/ntsysguide21.pdf
Mashilo, J., Shimelis, H. and Odindo, A. and Amelework, B. (2017) Genetic Diversity and Differentiation in Citron Watermelon (Citrullus lanatus var. citroides) Landraces Assessed by Simple Sequence Repeat Markers. Scientia Horticulturae, 214, 99-106. https://doi.org/10.1016/j.scienta.2016.11.015
Torutaeva, E., Asanaliev, A., Prieto-Linde, M.L., Zborowska, A., Ortiz, R., Bryngelsson, T. and Garkava-Gustavsson, L. (2014) Evaluation of Microsatellite-Based Genetic Diversity, Protein and Mineral Content in Chickpea Accessions Grown in Kyrgyzstan. Hereditas, 151, 81-90. https://doi.org/10.1111/hrd2.00042
Botstein, D., White, R.L., Skolnick, M.S. and Davis, R.W. (1980) Construction of a Genetic Linkage Map in Man Using Restriction Fragment Length Polymorphisms. American Journal of Human Genetics, 32, 314-331. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1686077/
Jost, L. (2008) Gst and Its Relatives Do Not Measure Differentiation. Molecular Ecology, 17, 4015-4026. https://doi.org/10.1111/j.1365-294X.2008.03887.x
Mujaju, C., Werlemark, G., Garkava-Gustavsson, L., Smulders, M.J.M. and Nybom, H. (2012) Molecular and Farmer-Based Comparison of a Wild-Weed and Landrace Complex of Watermelon in Zimbabwe. Australian Journal of Crop Science, 6, 656-661. http://www.cropj.com/mujaju_6_4_2012_656_661.pdf
Mujaju, C. and Nybom, H. (2011) Local-Level Assessment of Watermelon Genetic Diversity in a Village in Masvingo Province, Zimbabwe: Structure and Dynamics of Landraces Onfarm. African Journal of Agricultural Research, 6, 5822-5834.