Models and Algorithms for Diffuse Optical Tomographic System
- 1 Department of Physics, Indian Institute of Science, Bangalore, India
- 2 Department of Physics, Indian Institute of Science, Bangalore, India
- 3 Department of Instrumentation and Applied Physics, Indian Institute of Science, Bangalore, India
Abstract
Diffuse optical tomography (DOT) using near-infrared (NIR) light is a promising tool for noninvasive imaging of deep tissue. The approach is capable of reconstructing the quantitative optical parameters (absorption coefficient and scattering coefficient) of a soft tissue. The motivation for reconstructing the optical property variation is that it and, in particular, the absorption coefficient variation, can be used to diagnose different metabolic and disease states of tissue. In DOT, like any other medical imaging modality, the aim is to produce a reconstruction with good spatial resolution and in contrast with noisy measurements. The parameter recovery known as inverse problem in highly scattering biological tissues is a nonlinear and ill-posed problem and is generally solved through iterative methods. The algorithm uses a forward model to arrive at a prediction flux density at the tissue boundary. The forward model uses light transport models such as stochastic Monte Carlo simulation or deterministic methods such as radioactive transfer equation (RTE) or a simplified version of RTE namely the diffusion equation (DE). The finite element method (FEM) is used for discretizing the diffusion equation. The frequently used algorithm for solving the inverse problem is Newton-based Model based Iterative Image Reconstruction (N-MoBIIR). Many Variants of Gauss-Newton approaches are proposed for DOT reconstruction. The focus es of such developments are 1) to reduce the computational complexity ; 2) to improve spatial recovery ; and 3) to improve contrast recovery. These algorithms are 1) Hessian based MoBIIR ; 2) Broyden-based MoBIIR ; 3) adjoint Broyden-based MoBIIR ; and 4) pseudo-dynamic approaches.
- S. R. Arridge, “Optical Tomography in Medical Imaging,” Inverse Problems, Vol. 15, No. 2, 1999, pp. R41-R93.
- S. R. Arridge, M. Schweiger, M. Hiraoka and D. T. Delpy, “Finite Element Approach for Modelling Photon Transport in Tissue,” Medical Physics, Vol. 20, 1993, pp. 299-309. http://dx.doi.org/10.1118/1.597069
- B. Kanmani and R. M. Vasu, “Noise-Tolerance Analysis for Detection and Reconstruction of Absorbing Inhomogeneities with Diffuse Optical Tomography Using Singleand Phase-Correlated Dual-Source Schemes,” Physics in Medicine and Biology, Vol. 52, 2007, p. 1409. http://dx.doi.org/10.1088/0031-9155/52/5/013
- B. W. Pogue, S. C. Davis, X. Song, B. A. Brooksby, H. Dehghani and K. D. Paulsen, “Image Analysis Methods for Diffuse Optical Tomography,” Journal of Biomedical Optics, Vol. 11, 2006, Article ID: 1033001. http://dx.doi.org/10.1117/1.2209908
- S. K. Biswas, K. Rajan, R. M. Vasu and D. Roy, “Accelerated Gradient Based Diffuse Optical Tomographic Image Reconstruction,” Medical Physics, Vol. 38, 2011, p. 539. http://dx.doi.org/10.1118/1.3531572
- S. K. Biswas, K. Rajan and R. M. Vasu, “Practical Fully 3-D Reconstruction Algorithm for Diffuse Optical Tomography,” Journal of the Optical Society of America A, Vol. 29, 2012, p. 1017. http://dx.doi.org/10.1364/JOSAA.29.001017
- D. A. Boas, J. P. Culver, J. J. Stott and A. K. Dunn, “Three Dimensional Monte Carlo Code for Photon Migration through Complex Heterogeneous Media Including the Adult Human Head,” Optics Express, Vol. 10, No. 3, 2002, pp. 159-170. http://dx.doi.org/10.1364/OE.10.000159
- G. S. Abdoulaev and A. H. Hielscher, “Three-Dimensional Optical Tomography with the Equation of Radiative Transfer,” Journal of Electronic Imaging, Vol. 12, No. 4, 2003, pp. 594-601. http://dx.doi.org/10.1117/1.1587730
- M. Schweiger, S. R. Arridge and I. Nissila, “GaussNewton Method for Image Reconstruction in Diffuse Optical Tomography,” Physics in Medicine and Biology, Vol. 50, No. 10, 2005, pp. 2365-2386. http://dx.doi.org/10.1088/0031-9155/50/10/013
- C. K. Hayakawa and J. Spanier, F. Bevilacqua, A. K. Dunn, J. S. You, B. J. Tromberg and V. Venugopalan “Perturbation Monte Carlo Methods to Solve Inverse Photon Migration Problems in Heterogeneous Tissues,” Optics Letters, Vol. 26, No. 17, 2001, pp. 1335-1337.
- P. K. Yalavarthy, K. Karlekar, H. S. Patel, R. M. Vasu, M. Pramanik, P. C. Mathias, B. Jain and P. K. Gupta, “Experimental Investigation of Perturbation Monte-Carlo Based Derivative Estimation for Imaging Low-Scattering Tissue,” Optics Express, Vol. 13, No. 3, 2005, pp. 985-988.