Predicting the material stability is essential for accelerating the discovery of advanced materials in renewable energy, aerospace, and catalysis. Traditional approaches, such as Density Functional Theory (DFT), are accurate but computationally expensive and unsuitable for high-throughput screening. This study introduces a machine learning (ML) framework trained on high-dimensional data from the Open Quantum Materials Database (OQMD) to predict formation energy, a key stability metric. Among the evaluated models, deep learning outperformed Gradient Boosting Machines and Random Forest, achieving up to 0.88 R 2 prediction accuracy. Feature importance analysis identified thermodynamic, electronic, and structural properties as the primary drivers of stability, offering interpretable insights into material behavior. Compared to DFT, the proposed ML framework significantly reduces computational costs, enabling the rapid screening of thousands of compounds. These results highlight ML’s transformative potential in materials discovery, with direct applications in energy storage, semiconductors, and catalysis.
KeywordsHigh-Throughput Screening for Material DiscoveryMachine LearningData-Driven Structural Stability AnalysisAI for Chemical Space ExplorationInterpretable ML Models for Material StabilityThermodynamic Property Prediction Using AI
Mardirossian, N. and Head-Gordon, M. (2017) Thirty Years of Density Functional Theory in Computational Chemistry: An Overview and Extensive Assessment of 200 Density Functionals. Molecular Physics , 115, 2315-2372. https://doi.org/10.1080/00268976.2017.1333644
Choudhary, K., DeCost, B., Chen, C., Jain, A., Tavazza, F., Cohn, R., et al . (2022) Recent Advances and Applications of Deep Learning Methods in Materials Science. npj Computational Materials , 8, Article No. 59. https://doi.org/10.1038/s41524-022-00734-6
He, H., Wang, Y., Qi, Y., Xu, Z., Li, Y. and Wang, Y. (2023) From Prediction to Design: Recent Advances in Machine Learning for the Study of 2D Materials. Nano Energy , 118, Article ID: 108965. https://doi.org/10.1016/j.nanoen.2023.108965
Wani, A.A. (2024) Comprehensive Analysis of Clustering Algorithms: Exploring Limitations and Innovative Solutions. PeerJ Computer Science , 10, e2286. https://doi.org/10.7717/peerj-cs.2286
Sofi, S.A. and Wani, A.A. (2021) Predicting Material Stability Using Machine Learning. In: Kumar, R., Dohare, R.K., Dubey, H. and Singh, V.P., Eds., Applications of Advanced Computing in Systems , Springer, 203-209. https://doi.org/10.1007/978-981-33-4862-2_21
Cheng, G., Gong, X. and Yin, W. (2022) Crystal Structure Prediction by Combining Graph Network and Optimization Algorithm. Nature Communications , 13, Article No. 1492. https://doi.org/10.1038/s41467-022-29241-4
Goodall, R.E.A. and Lee, A.A. (2020) Predicting Materials Properties without Crystal Structure: Deep Representation Learning from Stoichiometry. Nature Communications , 11, Article No. 6280. https://doi.org/10.1038/s41467-020-19964-7
Schleder, G.R., Padilha, A.C.M., Acosta, C.M., Costa, M. and Fazzio, A. (2019) From DFT to Machine Learning: Recent Approaches to Materials Science—A Review. Journal of Physics : Materials , 2, Article ID: 032001. https://doi.org/10.1088/2515-7639/ab084b
Ward, L., Liu, R., Krishna, A., Hegde, V.I., Agrawal, A., Choudhary, A., et al . (2017) Including Crystal Structure Attributes in Machine Learning Models of Formation Energies via Voronoi Tessellations. Physical Review B , 96, Article ID: 024104. https://doi.org/10.1103/physrevb.96.024104
Wang, Z., Chen, X., Wu, Y., Jiang, L., Lin, S. and Qiu, G. (2025) A Robust and Interpretable Ensemble Machine Learning Model for Predicting Healthcare Insurance Fraud. Scientific Reports , 15, Article No. 218. https://doi.org/10.1038/s41598-024-82062-x
Megahed, K. (2025) Strength Prediction of ECC-CES Columns under Eccentric Compression Using Adaptive Sampling and ML Techniques. Scientific Reports , 15, Article No. 1202. https://doi.org/10.1038/s41598-024-83666-z
Liu, X., Zhang, J. and Pei, Z. (2023) Machine Learning for High-Entropy Alloys: Progress, Challenges and Opportunities. Progress in Materials Science , 131, Article ID: 101018. https://doi.org/10.1016/j.pmatsci.2022.101018
Coley, C.W., Eyke, N.S. and Jensen, K.F. (2020) Autonomous Discovery in the Chemical Sciences Part I: Progress. Angewandte Chemie International Edition , 59, 22858-22893. https://doi.org/10.1002/anie.201909987
Ulissi, Z.W., Medford, A.J., Bligaard, T. and Nørskov, J.K. (2017) To Address Surface Reaction Network Complexity Using Scaling Relations Machine Learning and DFT Calculations. Nature Communications , 8, Article No. 14621. https://doi.org/10.1038/ncomms14621
Qing, S. and Li, C. (2024) Data-Driven Prediction on Critical Mechanical Properties of Engineered Cementitious Composites Based on Machine Learning. Scientific Reports , 14, Article No. 15322. https://doi.org/10.1038/s41598-024-66123-9
Choudhary, K., DeCost, B., Chen, C., Jain, A., Tavazza, F., Cohn, R., et al . (2022) Recent Advances and Applications of Deep Learning Methods in Materials Science. npj Computational Materials , 8, Article No. 59. https://doi.org/10.1038/s41524-022-00734-6
Carlsson, G. (2020) Topological Methods for Data Modelling. Nature Reviews Physics , 2, 697-708. https://doi.org/10.1038/s42254-020-00249-3
Jablonka, K.M., Ongari, D., Moosavi, S.M. and Smit, B. (2020) Big-Data Science in Porous Materials: Materials Genomics and Machine Learning. Chemical Reviews , 120, 8066-8129. https://doi.org/10.1021/acs.chemrev.0c00004
Zhou, K.Q., Qin, Y. and Yuen, C. (2024) Graph Neural Network-Based Lithium-Ion Battery State of Health Estimation Using Partial Discharging Curve. Journal of Energy Storage , 100, Article ID: 113502. https://doi.org/10.1016/j.est.2024.113502
Hussain, M., O’Nils, M., Lundgren, J. and Mousavirad, S.J. (2024) A Comprehensive Review on Deep Learning-Based Data Fusion. IEEE Access , 12, 180093-180124. https://doi.org/10.1109/ACCESS.2024.3508271
Pyzer-Knapp, E.O., Pitera, J.W., Staar, P.W.J., Takeda, S., Laino, T., Sanders, D.P., et al . (2022) Accelerating Materials Discovery Using Artificial Intelligence, High Performance Computing and Robotics. npj Computational Materials , 8, Article No. 84. https://doi.org/10.1038/s41524-022-00765-z
Fang, Z. and Yan, Q. (2024) Towards Accurate Prediction of Configurational Disorder Properties in Materials Using Graph Neural Networks. npj Computational Materials , 10, Article No. 91. https://doi.org/10.1038/s41524-024-01283-w
Wu, Y., Wang, C., Ju, M., Jia, Q., Zhou, Q., Lu, S., et al . (2024) Universal Machine Learning Aided Synthesis Approach of Two-Dimensional Perovskites in a Typical Laboratory. Nature Communications , 15, Article No. 138. https://doi.org/10.1038/s41467-023-44236-5
Kirklin, S., Saal, J.E., Meredig, B., Thompson, A., Doak, J.W., Aykol, M., et al . (2015) The Open Quantum Materials Database (OQMD): Assessing the Accuracy of DFT Formation Energies. npj Computational Materials , 1, Article No. 15010. https://doi.org/10.1038/npjcompumats.2015.10
García-Laencina, P.J., Sancho-Gómez, J. and Figueiras-Vidal, A.R. (2009) Pattern Classification with Missing Data: A Review. Neural Computing and Applications , 19, 263-282. https://doi.org/10.1007/s00521-009-0295-6
Ayaz Wani, A. (2024) A Review of Challenges and Solutions for Using Machine Learning Approaches for Missing Data. International Journal of Engineering Applied Sciences and Technology , 9, 36-50. https://doi.org/10.33564/ijeast.2024.v09i05.005
Buuren, S.V. and Groothuis-Oudshoorn, K. (2011) Mice: Multivariate Imputation by Chained Equations in R . Journal of Statistical Software , 45, 1-67. https://doi.org/10.18637/jss.v045.i03
Gómez-Ramírez, J., Ávila-Villanueva, M. and Fernández-Blázquez, M.Á. (2020) Selecting the Most Important Self-Assessed Features for Predicting Conversion to Mild Cognitive Impairment with Random Forest and Permutation-Based Methods. Scientific Reports , 10, Article No. 20630. https://doi.org/10.1038/s41598-020-77296-4
Elton, D.C., Boukouvalas, Z., Butrico, M.S., Fuge, M.D. and Chung, P.W. (2018) Applying Machine Learning Techniques to Predict the Properties of Energetic Materials. Scientific Reports , 8, Article No. 9059. https://doi.org/10.1038/s41598-018-27344-x
Obuli Pranav, D., Babu, P.S., Indragandhi, V., Ashok, B., Vedhanayaki, S. and Kavitha, C. (2024) Enhanced SOC Estimation of Lithium Ion Batteries with RealTime Data Using Machine Learning Algorithms. Scientific Reports , 14, Article No. 16036. https://doi.org/10.1038/s41598-024-66997-9
Wani, A.A. and Abeer, F. (2025) Application of Machine Learning Techniques for Warfarin Dosage Prediction: A Case Study on the MIMIC-III Dataset. PeerJ Computer Science , 11, e2612. https://doi.org/10.7717/peerj-cs.2612
Feng, Z., Cheng, Y., Khlyustova, A., Wani, A., Franklin, T., Varner, J.D., et al . (2023) Virtual High‐throughput Screening of Vapor-Deposited Amphiphilic Polymers for Inhibiting Biofilm Formation. Advanced Materials Technologies , 8, Article ID: 2201533. https://doi.org/10.1002/admt.202201533