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Journal of Biophysical Chemistry (JBPC) is an international journal dedicated to the latest advancements in biophysical chemistry. The goal of this journal is to provide a platform for scientists and academicians all over the world to promote, share, and discuss various new issues and developments in different areas o…
Osamu Takahashi, Toshinori Okinaga, Kenjiro Iwanaga, Manabu Habu, Wataru Ariyoshi, Kazuhiro Tominaga, Norikazu Nishino, Tatsuji Nishihara
Epigenetic modifications such as histone deacetylation are commonly related to tumor development and histone deacetylase (HDAC) inhibitors have been shown to be potential drugs for cancer treatment. In the present study, we investigated the effects of a novel…
Cenmidtal C. Mulyanto, Rosari Saleh
In this present study, we predicted the neutralizing epitope of a modeled H5N1 hemagglutinin 1046T when interacted with a modeled monoclonal antibody variable fragment 8H5Fv using molecular dynamics simulation. Following the production run of the molecular dy…
Muhammad Younas Khan Barozai, Muhammad Din, Iftikhar Ahmed Baloch
MicroRNAs (miRNAs) are small, non-coding and regulatory RNAs about 20 to 24 nucleotides long. Their conserved nature among the various organisms makes them a good source of new miRNAs discovery by comparative genomics approach. This study resulted in 34 miRNA…
Jorge Ricardo Moreira Castro, Carlos Alessando Fuzo, Léo Degrève
In this work, the role of the disulfide bridges in the maintenance of the secondary structure of the antimicrobial peptides androctonin, poly-phemusin-I, and thanatin is analyzed on the basis of their structural characteristics and of three of their respectiv…
Kalachand Mahali, Sanjay Roy, Bijoy Krishna Dolui
Standard free energies (ΔG<sup>0</sup><sub>t</sub>(i) ) and entropies (ΔS<sup>0</sup><sub>t</sub>(i)) of transfer of some homologous α-amino acids viz. glycine (gly), dl-alanine (ala), dl-α-amino butyric acid (aba) and dl-nor-valine (nor-val) from protic ethy…
Renner de Souza Leite, Wilson Franco, Heloísa Sobreiro Selistre-de-Araujo
ACLMT is a Lys49-phospholipase A<sub>2</sub> myotoxin isolated from the venom of the Agkistrodon contortrix laticinctus snake. This study investigated the mechanisms involved in effect of ACLMT on membrane water permeability by examining the role of extracell…
Gongke Wang, Wen Tang, Xiaoxiao Hao, Changling Yan, Yan Lu
The binding mechanism of the interactions of halide ions (F–, Br– and I–) with bovine serum albumin (BSA) and hemoglobin (Hb) were studied at different temperatures, by using ion-selective electrodes. The experimental data were treated according to Klotz equa…
Alexander A. Tulub
A new radical mechanism of nucleotide polymerization is found. The finding is based on the Car-Parrinello molecular dynamics computations at 310 K with an additional spin-spin coupling term for 31P and 1H atoms and a radical pair spin term included. The mecha…
Nitin S. Sapre, Tarang Bhati, Swagata Gupta, Nilanjana Pancholi, Urmila Raghuvanshi, Divya Dubey, Vandana Rajopadhyay, Neelima Sapre
For the first time we report quantitative structure activity relationship (QSAR) studies based on Kier-Hall Electrotopological State (E-State) Indices for Dihydroalkoxybenzyloxopyrimidines (DABO) derivatives acting as NNRTIs of HIV-1. A dataset of 74 compound…
Viraja R. Palwai, Leif A. Eriksson
Bleomycin (Blm) is a natural antibiotic with antitumour activity, used as a combination drug in treatment of various types of cancers. Blm intercalates with DNA and will in the presence of a redox metal ion and molecular oxygen form an activated bleomycin com…
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Journal of Biophysical Chemistry (JBPC) is an international journal dedicated to the latest advancements in biophysical chemistry. The goal of this journal is to provide a platform for scientists and academicians all over the world to promote, share, and discuss various new issues and developments in different areas o… All articles are open access under a CC BY 4.0 licence, with authors retaining copyright.
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